RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 SP8Q8IXZ3 490 aa23.84■■□□□ 1.41
PKD1-223ENST00000561668 GRAPLQ8TC17 118 aaPredicted RBP23.84■■□□□ 1.41
PKD1-223ENST00000561668 JDP2Q8WYK2 163 aa23.84■■□□□ 1.41
PKD1-223ENST00000561668 VEGFAP15692 232 aaPredicted RBP23.83■■□□□ 1.41
PKD1-223ENST00000561668 SUPT20HQ8NEM7 779 aa23.82■■□□□ 1.4
PKD1-223ENST00000561668 DICER1Q9UPY3 1922 aaKnown RBP23.81■■□□□ 1.4
PKD1-223ENST00000561668 PDE8AO60658 829 aa23.81■■□□□ 1.4
PKD1-223ENST00000561668 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
PKD1-223ENST00000561668 JARID2Q92833 1246 aaPredicted RBP23.81■■□□□ 1.4
PKD1-223ENST00000561668 IGKV5-2P06315 115 aa23.8■■□□□ 1.4
PKD1-223ENST00000561668 CWF19L2Q2TBE0 894 aaKnown RBP23.8■■□□□ 1.4
PKD1-223ENST00000561668 CCDC152Q4G0S7 254 aa23.8■■□□□ 1.4
PKD1-223ENST00000561668 DPP8Q6V1X1 898 aaPredicted RBP23.8■■□□□ 1.4
PKD1-223ENST00000561668 MPNDQ8N594 471 aa23.8■■□□□ 1.4
PKD1-223ENST00000561668 TIAM2Q8IVF5 1701 aa23.79■■□□□ 1.4
PKD1-223ENST00000561668 NEURL1BA8MQ27 555 aa23.79■■□□□ 1.4
PKD1-223ENST00000561668 ALDH1L2Q3SY69 923 aa23.79■■□□□ 1.4
PKD1-223ENST00000561668 LARGE2Q8N3Y3 721 aa23.79■■□□□ 1.4
PKD1-223ENST00000561668 LAMB2P55268 1798 aa23.78■■□□□ 1.4
PKD1-223ENST00000561668 BRPF1P55201 1214 aaPredicted RBP23.78■■□□□ 1.4
PKD1-223ENST00000561668 RPS8P62241 208 aaKnown RBP23.78■■□□□ 1.4
PKD1-223ENST00000561668 VPS33BQ9H267 617 aa23.78■■□□□ 1.4
PKD1-223ENST00000561668 DDNO94850 711 aaPredicted RBP23.77■■□□□ 1.4
PKD1-223ENST00000561668 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
PKD1-223ENST00000561668 LINS1Q8NG48 757 aa23.77■■□□□ 1.4
PKD1-223ENST00000561668 CDHR2Q9BYE9 1310 aa23.77■■□□□ 1.4
PKD1-223ENST00000561668 DDX60Q8IY21 1712 aaKnown RBP23.76■■□□□ 1.39
PKD1-223ENST00000561668 EIF6P56537 245 aaKnown RBP23.76■■□□□ 1.39
PKD1-223ENST00000561668 RBM46Q8TBY0 533 aaKnown RBP23.76■■□□□ 1.39
PKD1-223ENST00000561668 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
PKD1-223ENST00000561668 CELF1Q92879 486 aaKnown RBP23.76■■□□□ 1.39
PKD1-223ENST00000561668 PPIP5K2O43314 1243 aa23.75■■□□□ 1.39
PKD1-223ENST00000561668 GCKRQ14397 625 aa23.75■■□□□ 1.39
PKD1-223ENST00000561668 H7C1W4 665 aa23.74■■□□□ 1.39
PKD1-223ENST00000561668 FZD9O00144 591 aa23.74■■□□□ 1.39
PKD1-223ENST00000561668 UBE3BQ7Z3V4 1068 aa23.74■■□□□ 1.39
PKD1-223ENST00000561668 NIM1KQ8IY84 436 aa23.74■■□□□ 1.39
PKD1-223ENST00000561668 NSFL1CQ9UNZ2 370 aaKnown RBP23.74■■□□□ 1.39
PKD1-223ENST00000561668 IQCA1LA6NCM1 817 aa23.73■■□□□ 1.39
PKD1-223ENST00000561668 CCDC85AQ96PX6 553 aaPredicted RBP23.73■■□□□ 1.39
PKD1-223ENST00000561668 RTFDC1Q9BY42 306 aaPredicted RBP23.73■■□□□ 1.39
PKD1-223ENST00000561668 F6X3S4 739 aa23.72■■□□□ 1.39
PKD1-223ENST00000561668 FSTL1Q12841 308 aa23.72■■□□□ 1.39
PKD1-223ENST00000561668 SEC31BQ9NQW1 1179 aa23.72■■□□□ 1.39
PKD1-223ENST00000561668 SNED1Q8TER0 1413 aa23.72■■□□□ 1.39
PKD1-223ENST00000561668 HSPA6P17066 643 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 CTSWP56202 376 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 AOC3Q16853 763 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 SLC4A10Q6U841 1118 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 GPC2Q8N158 579 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 SMC1BQ8NDV3 1235 aa23.71■■□□□ 1.39
PKD1-223ENST00000561668 PTPRCP08575 1304 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 C6orf229H3BNL8 230 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
PKD1-223ENST00000561668 SLC51AQ86UW1 340 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 CDC5LQ99459 802 aaKnown RBP23.7■■□□□ 1.38
PKD1-223ENST00000561668 GJA3Q9Y6H8 435 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 TAF1P21675 1872 aa23.7■■□□□ 1.38
PKD1-223ENST00000561668 ZNF541Q9H0D2 1346 aa23.69■■□□□ 1.38
PKD1-223ENST00000561668 POTECB2RU33 542 aa23.69■■□□□ 1.38
PKD1-223ENST00000561668 BEND3Q5T5X7 828 aa23.69■■□□□ 1.38
PKD1-223ENST00000561668 ANKIB1Q9P2G1 1089 aa23.69■■□□□ 1.38
PKD1-223ENST00000561668 WDR90Q96KV7 1748 aa23.68■■□□□ 1.38
PKD1-223ENST00000561668 WASHC4Q2M389 1173 aa23.68■■□□□ 1.38
PKD1-223ENST00000561668 L3MBTL3Q96JM7 780 aaPredicted RBP23.68■■□□□ 1.38
PKD1-223ENST00000561668 EYA3Q99504 573 aa23.68■■□□□ 1.38
PKD1-223ENST00000561668 C9orf78Q9NZ63 289 aaPredicted RBP23.68■■□□□ 1.38
PKD1-223ENST00000561668 ZNRF3Q9ULT6 936 aa23.68■■□□□ 1.38
PKD1-223ENST00000561668 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
PKD1-223ENST00000561668 SRCIN1Q9C0H9 1055 aa23.67■■□□□ 1.38
PKD1-223ENST00000561668 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
PKD1-223ENST00000561668 GPSM2P81274 684 aa23.66■■□□□ 1.38
PKD1-223ENST00000561668 PLA2G12BQ9BX93 195 aa23.66■■□□□ 1.38
PKD1-223ENST00000561668 GREM2Q9H772 168 aa23.66■■□□□ 1.38
PKD1-223ENST00000561668 G3V3G9 751 aa23.65■■□□□ 1.38
PKD1-223ENST00000561668 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
PKD1-223ENST00000561668 LMOD1P29536 600 aaPredicted RBP23.65■■□□□ 1.38
PKD1-223ENST00000561668 DCAF8Q5TAQ9 597 aa23.65■■□□□ 1.38
PKD1-223ENST00000561668 ZC3H12CQ9C0D7 883 aaKnown RBP23.65■■□□□ 1.38
PKD1-223ENST00000561668 RIMBP2O15034 1052 aa23.64■■□□□ 1.37
PKD1-223ENST00000561668 IGHMBP2P38935 993 aaKnown RBP23.64■■□□□ 1.37
PKD1-223ENST00000561668 APLP1P51693 650 aa23.64■■□□□ 1.37
PKD1-223ENST00000561668 SMC4Q9NTJ3 1288 aa23.64■■□□□ 1.37
PKD1-223ENST00000561668 GRM8O00222 908 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 CASP7P55210 303 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 TNIP1Q15025 636 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 PNMA8AQ86V59 439 aaPredicted RBP23.63■■□□□ 1.37
PKD1-223ENST00000561668 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 TAF1DQ9H5J8 278 aaPredicted RBP23.63■■□□□ 1.37
PKD1-223ENST00000561668 PODXL2Q9NZ53 605 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 POLLQ9UGP5 575 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 GGA1Q9UJY5 639 aa23.63■■□□□ 1.37
PKD1-223ENST00000561668 TBC1D16Q8TBP0 767 aa23.62■■□□□ 1.37
PKD1-223ENST00000561668 MPHOSPH8Q99549 860 aa23.62■■□□□ 1.37
PKD1-223ENST00000561668 BCL2L13Q9BXK5 485 aa23.62■■□□□ 1.37
PKD1-223ENST00000561668 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
PKD1-223ENST00000561668 CLEC11AQ9Y240 323 aa23.62■■□□□ 1.37
PKD1-223ENST00000561668 RTL9Q8NET4 1388 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms