RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TAF1DQ9H5J8 278 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-210ENST00000560825 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
GABPB1-210ENST00000560825 GPR101Q96P66 508 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-210ENST00000560825 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-210ENST00000560825 IGKV5-2P06315 115 aa14.48□□□□□ -0.09
GABPB1-210ENST00000560825 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
GABPB1-210ENST00000560825 SEC31BQ9NQW1 1179 aa14.48□□□□□ -0.09
GABPB1-210ENST00000560825 GJA3Q9Y6H8 435 aa14.48□□□□□ -0.09
GABPB1-210ENST00000560825 SCNN1DP51172 638 aa14.47□□□□□ -0.09
GABPB1-210ENST00000560825 GRAPQ13588 217 aa14.47□□□□□ -0.09
GABPB1-210ENST00000560825 RIC3Q7Z5B4 369 aa14.47□□□□□ -0.09
GABPB1-210ENST00000560825 LARGE2Q8N3Y3 721 aa14.47□□□□□ -0.09
GABPB1-210ENST00000560825 GRAPLQ8TC17 118 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-210ENST00000560825 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
GABPB1-210ENST00000560825 CCDC85AQ96PX6 553 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-210ENST00000560825 FANCIQ9NVI1 1328 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 SHTN1A0MZ66 631 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-210ENST00000560825 IRS4O14654 1257 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-210ENST00000560825 PPIP5K2O43314 1243 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 ANP32CO43423 234 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 EPS15P42566 896 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
GABPB1-210ENST00000560825 EAPPQ56P03 285 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-210ENST00000560825 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 SP8Q8IXZ3 490 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 RTFDC1Q9BY42 306 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-210ENST00000560825 MAP3K2Q9Y2U5 619 aa14.46□□□□□ -0.09
GABPB1-210ENST00000560825 PASKQ96RG2 1323 aa14.46□□□□□ -0.1
GABPB1-210ENST00000560825 A0A1B0GUL6 1792 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 YDJCA8MPS7 323 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 ITGBL1O95965 494 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 KCNA4P22459 653 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 EPHX2P34913 555 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 SF3B3Q15393 1217 aaKnown RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 CWF19L2Q2TBE0 894 aaKnown RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 TWISTNBQ3B726 338 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 CC2D2BQ6DHV5 1058 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
GABPB1-210ENST00000560825 GPC2Q8N158 579 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 KCNQ5Q9NR82 932 aa14.45□□□□□ -0.1
GABPB1-210ENST00000560825 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 BBOX1O75936 387 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 GPSM2P81274 684 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 MAP1SQ66K74 1059 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-210ENST00000560825 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 JDP2Q8WYK2 163 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 METTL22Q9BUU2 404 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-210ENST00000560825 HACL1Q9UJ83 578 aa14.44□□□□□ -0.1
GABPB1-210ENST00000560825 PSME4Q14997 1843 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 CXCL9Q07325 125 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 CCDC30Q5VVM6 783 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 DPP8Q6V1X1 898 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-210ENST00000560825 MPNDQ8N594 471 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 ZBTB38Q8NAP3 1195 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-210ENST00000560825 POLLQ9UGP5 575 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 TRPM7Q96QT4 1865 aa14.43□□□□□ -0.1
GABPB1-210ENST00000560825 RAD17O75943 681 aa14.42□□□□□ -0.1
GABPB1-210ENST00000560825 EXOSC9Q06265 439 aaKnown RBP14.42□□□□□ -0.1
GABPB1-210ENST00000560825 LDHDQ86WU2 507 aa14.42□□□□□ -0.1
GABPB1-210ENST00000560825 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
GABPB1-210ENST00000560825 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
GABPB1-210ENST00000560825 IQCA1LA6NCM1 817 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 VAMP4O75379 141 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 NIM1KQ8IY84 436 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 IL16Q14005 1332 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 RIMBP2O15034 1052 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 PCCAP05165 728 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-210ENST00000560825 EIF6P56537 245 aaKnown RBP14.41□□□□□ -0.1
GABPB1-210ENST00000560825 DLK2Q6UY11 383 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 KSR2Q6VAB6 950 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 CCDC191Q8NCU4 936 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 DBNDD1Q9H9R9 158 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-210ENST00000560825 MKRN1Q9UHC7 482 aaKnown RBP14.41□□□□□ -0.1
GABPB1-210ENST00000560825 NSFL1CQ9UNZ2 370 aaKnown RBP14.41□□□□□ -0.1
GABPB1-210ENST00000560825 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
GABPB1-210ENST00000560825 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-210ENST00000560825 ZNRF3Q9ULT6 936 aa14.4□□□□□ -0.1
GABPB1-210ENST00000560825 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-210ENST00000560825 RTL9Q8NET4 1388 aa14.39□□□□□ -0.11
GABPB1-210ENST00000560825 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
GABPB1-210ENST00000560825 TRAF5O00463 557 aa14.39□□□□□ -0.11
GABPB1-210ENST00000560825 EGFRP00533 1210 aa14.39□□□□□ -0.11
GABPB1-210ENST00000560825 HIRAP54198 1017 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-210ENST00000560825 RPS8P62241 208 aaKnown RBP14.39□□□□□ -0.11
GABPB1-210ENST00000560825 DOK7Q18PE1 504 aa14.39□□□□□ -0.11
GABPB1-210ENST00000560825 F6X3S4 739 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 CASP7P55210 303 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 FLIIQ13045 1269 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 GRIPAP1Q4V328 841 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 TBC1D16Q8TBP0 767 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 TRPM4Q8TD43 1214 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms