RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 HIP1O00291 1037 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
PBX1-219ENST00000560641 MTX1Q13505 466 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 MSL3Q8N5Y2 521 aaKnown RBP18.81■□□□□ 0.6
PBX1-219ENST00000560641 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 IL1RAPL2Q9NP60 686 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 SPG7Q9UQ90 795 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 EFCAB8A8MWE9 144 aa18.8■□□□□ 0.6
PBX1-219ENST00000560641 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
PBX1-219ENST00000560641 TMCO3Q6UWJ1 677 aa18.8■□□□□ 0.6
PBX1-219ENST00000560641 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
PBX1-219ENST00000560641 RCOR1Q9UKL0 485 aa18.8■□□□□ 0.6
PBX1-219ENST00000560641 ENGASEQ8NFI3 743 aa18.8■□□□□ 0.6
PBX1-219ENST00000560641 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 TADA3O75528 432 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 LARP1Q6PKG0 1096 aaKnown RBP18.79■□□□□ 0.6
PBX1-219ENST00000560641 RASSF4Q9H2L5 321 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 RPS6KB1P23443 525 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 NOP2P46087 812 aaKnown RBP18.79■□□□□ 0.6
PBX1-219ENST00000560641 GPS2Q13227 327 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 ARHGAP29Q52LW3 1261 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 PPP1R42Q7Z4L9 355 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 NECAB1Q8N987 351 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 EVI5LQ96CN4 794 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
PBX1-219ENST00000560641 ADD1P35611 737 aaKnown RBP18.78■□□□□ 0.6
PBX1-219ENST00000560641 TOB2Q14106 344 aaPredicted RBP18.78■□□□□ 0.6
PBX1-219ENST00000560641 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 BICD2Q8TD16 824 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 NAT10Q9H0A0 1025 aaKnown RBP18.78■□□□□ 0.6
PBX1-219ENST00000560641 MRC1P22897 1456 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 ETF1P62495 437 aaKnown RBP18.78■□□□□ 0.6
PBX1-219ENST00000560641 GOLGA5Q8TBA6 731 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
PBX1-219ENST00000560641 RBM8AQ9Y5S9 174 aaKnown RBP18.78■□□□□ 0.6
PBX1-219ENST00000560641 DNAI1Q9UI46 699 aa18.77■□□□□ 0.6
PBX1-219ENST00000560641 SLC27A2O14975 620 aa18.77■□□□□ 0.59
PBX1-219ENST00000560641 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.59
PBX1-219ENST00000560641 PSME1Q06323 249 aa18.77■□□□□ 0.59
PBX1-219ENST00000560641 TPRNQ4KMQ1 711 aa18.77■□□□□ 0.59
PBX1-219ENST00000560641 FAM173BQ6P4H8 233 aa18.77■□□□□ 0.59
PBX1-219ENST00000560641 CWC15Q9P013 229 aaKnown RBP18.77■□□□□ 0.59
PBX1-219ENST00000560641 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.59
PBX1-219ENST00000560641 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 FERMT3Q86UX7 667 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 CEP57L1Q8IYX8 460 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 RPS6KA5O75582 802 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 TRMT1Q9NXH9 659 aaKnown RBP18.76■□□□□ 0.59
PBX1-219ENST00000560641 A2ML1A8K2U0 1454 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
PBX1-219ENST00000560641 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
PBX1-219ENST00000560641 LRRN4CLQ8ND94 238 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
PBX1-219ENST00000560641 MAP4K4O95819 1239 aaPredicted RBP18.75■□□□□ 0.59
PBX1-219ENST00000560641 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 TRIM65Q6PJ69 517 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 FBXO18Q8NFZ0 1043 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 LLPHQ9BRT6 129 aaKnown RBP18.75■□□□□ 0.59
PBX1-219ENST00000560641 TMX1Q9H3N1 280 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 GEMIN8Q9NWZ8 242 aaKnown RBP18.75■□□□□ 0.59
PBX1-219ENST00000560641 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
PBX1-219ENST00000560641 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 SMARCC2Q8TAQ2 1214 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 CHMP3Q9Y3E7 222 aa18.75■□□□□ 0.59
PBX1-219ENST00000560641 BECN2A8MW95 431 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 SYT10Q6XYQ8 523 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
PBX1-219ENST00000560641 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 UBXN4Q92575 508 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
PBX1-219ENST00000560641 GPR161Q8N6U8 529 aaKnown RBP18.74■□□□□ 0.59
PBX1-219ENST00000560641 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
PBX1-219ENST00000560641 NRDCO43847 1150 aa18.73■□□□□ 0.59
PBX1-219ENST00000560641 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
PBX1-219ENST00000560641 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
PBX1-219ENST00000560641 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
PBX1-219ENST00000560641 REXO1L1PQ8IX06 675 aa18.73■□□□□ 0.59
PBX1-219ENST00000560641 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
PBX1-219ENST00000560641 CHRM1P11229 460 aaPredicted RBP18.72■□□□□ 0.59
PBX1-219ENST00000560641 CASQ1P31415 396 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 ZSCAN26Q16670 478 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 KRBA2Q6ZNG9 492 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 LAMA4Q16363 1823 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 MYO1CO00159 1063 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 GOLPH3LQ9H4A5 285 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
PBX1-219ENST00000560641 SRLQ86TD4 932 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms