RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
USP8-209ENST00000560297 HOXA10P31260 410 aaPredicted RBP15.37■□□□□ 0.05
USP8-209ENST00000560297 STYK1Q6J9G0 422 aa15.37■□□□□ 0.05
USP8-209ENST00000560297 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
USP8-209ENST00000560297 DPEP1P16444 411 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 AAMPQ13685 434 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 LMBR1LQ6UX01 489 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
USP8-209ENST00000560297 CNKSR1Q969H4 720 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 CRAMP1Q96RY5 1269 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
USP8-209ENST00000560297 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
USP8-209ENST00000560297 KCNA3P22001 575 aa15.35■□□□□ 0.05
USP8-209ENST00000560297 CHRNA5P30532 468 aa15.35■□□□□ 0.05
USP8-209ENST00000560297 RABL6Q3YEC7 729 aaPredicted RBP15.35■□□□□ 0.05
USP8-209ENST00000560297 EPHA10Q5JZY3 1008 aa15.35■□□□□ 0.05
USP8-209ENST00000560297 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.052e-9■■□□□ 11.4
USP8-209ENST00000560297 PIM2Q9P1W9 311 aa15.35■□□□□ 0.05
USP8-209ENST00000560297 LRRFIP2Q9Y608 721 aaKnown RBP15.35■□□□□ 0.05
USP8-209ENST00000560297 AFDNP55196 1824 aaKnown RBP15.34■□□□□ 0.05
USP8-209ENST00000560297 BBOX1O75936 387 aa15.34■□□□□ 0.05
USP8-209ENST00000560297 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
USP8-209ENST00000560297 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
USP8-209ENST00000560297 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
USP8-209ENST00000560297 IFIT5Q13325 482 aaKnown RBP15.33■□□□□ 0.04
USP8-209ENST00000560297 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.04
USP8-209ENST00000560297 NLGN2Q8NFZ4 835 aa15.33■□□□□ 0.04
USP8-209ENST00000560297 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.04
USP8-209ENST00000560297 GREM2Q9H772 168 aa15.33■□□□□ 0.04
USP8-209ENST00000560297 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
USP8-209ENST00000560297 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
USP8-209ENST00000560297 LRP5O75197 1615 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 ITGA6P23229 1130 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 RPS8P62241 208 aaKnown RBP15.32■□□□□ 0.04
USP8-209ENST00000560297 MTX1Q13505 466 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 GRAPQ13588 217 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 DALRD3Q5D0E6 543 aaKnown RBP15.32■□□□□ 0.04
USP8-209ENST00000560297 TMC4Q7Z404 712 aa15.32■□□□□ 0.04
USP8-209ENST00000560297 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
USP8-209ENST00000560297 CCDC85AQ96PX6 553 aaPredicted RBP15.32■□□□□ 0.04
USP8-209ENST00000560297 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
USP8-209ENST00000560297 ANKRD18AQ8IVF6 992 aa15.31■□□□□ 0.04
USP8-209ENST00000560297 RPAP2Q8IXW5 612 aaPredicted RBP15.31■□□□□ 0.04
USP8-209ENST00000560297 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
USP8-209ENST00000560297 SEC31BQ9NQW1 1179 aa15.31■□□□□ 0.04
USP8-209ENST00000560297 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
USP8-209ENST00000560297 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
USP8-209ENST00000560297 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
USP8-209ENST00000560297 SRGAP3O43295 1099 aa15.29■□□□□ 0.04
USP8-209ENST00000560297 TAF7LQ5H9L4 462 aa15.29■□□□□ 0.04
USP8-209ENST00000560297 PRPF40BQ6NWY9 871 aaKnown RBP15.29■□□□□ 0.04
USP8-209ENST00000560297 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
USP8-209ENST00000560297 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
USP8-209ENST00000560297 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
USP8-209ENST00000560297 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
USP8-209ENST00000560297 NEFLP07196 543 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 CELF1Q92879 486 aaKnown RBP15.28■□□□□ 0.04
USP8-209ENST00000560297 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
USP8-209ENST00000560297 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
USP8-209ENST00000560297 HMMRO75330 724 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 SOGA3Q5TF21 947 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 SSH3Q8TE77 659 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 C7orf43Q8WVR3 580 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 BCS1LQ9Y276 419 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
USP8-209ENST00000560297 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.03
USP8-209ENST00000560297 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
USP8-209ENST00000560297 SRCAPQ6ZRS2 3230 aa15.26■□□□□ 0.03
USP8-209ENST00000560297 PNMA6EA0A0J9YXQ4 647 aa15.26■□□□□ 0.03
USP8-209ENST00000560297 RFX5P48382 616 aaPredicted RBP15.26■□□□□ 0.03
USP8-209ENST00000560297 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
USP8-209ENST00000560297 POLA2Q14181 598 aa15.26■□□□□ 0.03
USP8-209ENST00000560297 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
USP8-209ENST00000560297 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
USP8-209ENST00000560297 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
USP8-209ENST00000560297 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
USP8-209ENST00000560297 LAMB2P55268 1798 aa15.24■□□□□ 0.03
USP8-209ENST00000560297 C21orf2O43822 256 aa15.24■□□□□ 0.03
USP8-209ENST00000560297 NPM3O75607 178 aaKnown RBP15.24■□□□□ 0.03
USP8-209ENST00000560297 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
USP8-209ENST00000560297 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
USP8-209ENST00000560297 MINPP1Q9UNW1 487 aa15.24■□□□□ 0.03
USP8-209ENST00000560297 EYA2O00167 538 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 CIAO1O76071 339 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 GPR162Q16538 588 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 CCDC93Q567U6 631 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 SIRT2Q8IXJ6 389 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 ANKRD2Q9GZV1 360 aa15.23■□□□□ 0.03
USP8-209ENST00000560297 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms