RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 METTL22Q9BUU2 404 aaPredicted RBP12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 HTRA3P83110 453 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 KSR2Q6VAB6 950 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 GPC2Q8N158 579 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 TAF1DQ9H5J8 278 aaPredicted RBP12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 COL4A5P29400 1685 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
AC104041.1-201ENST00000560054 LAMB2P55268 1798 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 TMC4Q7Z404 712 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 MPNDQ8N594 471 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
AC104041.1-201ENST00000560054 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 VAMP4O75379 141 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 AOC3Q16853 763 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 G2E3Q7L622 706 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
AC104041.1-201ENST00000560054 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
AC104041.1-201ENST00000560054 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
AC104041.1-201ENST00000560054 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
AC104041.1-201ENST00000560054 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
AC104041.1-201ENST00000560054 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
AC104041.1-201ENST00000560054 EPHX2P34913 555 aa12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
AC104041.1-201ENST00000560054 SCN4AP35499 1836 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 PDE8AO60658 829 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 NEXNQ0ZGT2 675 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 FLIIQ13045 1269 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 TAF1P21675 1872 aa12.48□□□□□ -0.41
AC104041.1-201ENST00000560054 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 SCNN1DP51172 638 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 GPSM2P81274 684 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 CXCL9Q07325 125 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 MYH16Q9H6N6 1097 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 COL4A1P02462 1669 aa12.47□□□□□ -0.41
AC104041.1-201ENST00000560054 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 H7C1W4 665 aa12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 EPS15P42566 896 aa12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 POLLQ9UGP5 575 aa12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
AC104041.1-201ENST00000560054 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
AC104041.1-201ENST00000560054 LRRC37AA6NMS7 1700 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 PASKQ96RG2 1323 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 DSG3P32926 999 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 JMYQ8N9B5 988 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
AC104041.1-201ENST00000560054 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 RAD17O75943 681 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 CTSWP56202 376 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 GCKRQ14397 625 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 MAP1SQ66K74 1059 aaPredicted RBP12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 CNTROBQ8N137 903 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
AC104041.1-201ENST00000560054 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms