RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PDE3AQ14432 1141 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 EPHA10Q5JZY3 1008 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
GABPB1-208ENST00000558970 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 CD2APQ9Y5K6 639 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
GABPB1-208ENST00000558970 CTSWP56202 376 aa15.61■□□□□ 0.09
GABPB1-208ENST00000558970 SLC10A5Q5PT55 438 aa15.61■□□□□ 0.09
GABPB1-208ENST00000558970 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
GABPB1-208ENST00000558970 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
GABPB1-208ENST00000558970 GNAI3P08754 354 aa15.6■□□□□ 0.09
GABPB1-208ENST00000558970 GPR162Q16538 588 aa15.6■□□□□ 0.09
GABPB1-208ENST00000558970 KAZALD1Q96I82 304 aa15.6■□□□□ 0.09
GABPB1-208ENST00000558970 UTYO14607 1347 aa15.6■□□□□ 0.09
GABPB1-208ENST00000558970 SRGNP10124 158 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 TGFB2P61812 414 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 FOXO4P98177 505 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 LMBR1LQ6UX01 489 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 GREM2Q9H772 168 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 DDX19BQ9UMR2 479 aa15.59■□□□□ 0.09
GABPB1-208ENST00000558970 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
GABPB1-208ENST00000558970 HSP90B1P14625 803 aaKnown RBP15.58■□□□□ 0.08
GABPB1-208ENST00000558970 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
GABPB1-208ENST00000558970 SLC51AQ86UW1 340 aa15.58■□□□□ 0.08
GABPB1-208ENST00000558970 TTLL11Q8NHH1 800 aa15.58■□□□□ 0.08
GABPB1-208ENST00000558970 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
GABPB1-208ENST00000558970 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
GABPB1-208ENST00000558970 ARFGEF1Q9Y6D6 1849 aa15.58■□□□□ 0.08
GABPB1-208ENST00000558970 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 GNAI2P04899 355 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 NPR1P16066 1061 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 KCNA3P22001 575 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 DDX46Q7L014 1031 aaKnown RBP15.57■□□□□ 0.08
GABPB1-208ENST00000558970 ANKRD44Q8N8A2 993 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
GABPB1-208ENST00000558970 GOLGB1Q14789 3259 aaKnown RBP15.57■□□□□ 0.08
GABPB1-208ENST00000558970 KLRG2A4D1S0 409 aaPredicted RBP15.56■□□□□ 0.08
GABPB1-208ENST00000558970 ITGA6P23229 1130 aa15.56■□□□□ 0.08
GABPB1-208ENST00000558970 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
GABPB1-208ENST00000558970 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
GABPB1-208ENST00000558970 CELF1Q92879 486 aaKnown RBP15.56■□□□□ 0.08
GABPB1-208ENST00000558970 ZNF594Q96JF6 807 aaPredicted RBP15.56■□□□□ 0.08
GABPB1-208ENST00000558970 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
GABPB1-208ENST00000558970 PRPF40BQ6NWY9 871 aaKnown RBP15.55■□□□□ 0.08
GABPB1-208ENST00000558970 OLFM4Q6UX06 510 aa15.55■□□□□ 0.08
GABPB1-208ENST00000558970 KLHDC4Q8TBB5 520 aa15.55■□□□□ 0.08
GABPB1-208ENST00000558970 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
GABPB1-208ENST00000558970 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 IFIT5Q13325 482 aaKnown RBP15.54■□□□□ 0.08
GABPB1-208ENST00000558970 CCDC57Q2TAC2 916 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 TAF7LQ5H9L4 462 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 TTLL6Q8N841 843 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 LRRC37AA6NMS7 1700 aa15.54■□□□□ 0.08
GABPB1-208ENST00000558970 CCDC88AQ3V6T2 1871 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 CSF1RP07333 972 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 GRAPQ13588 217 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 DALRD3Q5D0E6 543 aaKnown RBP15.53■□□□□ 0.08
GABPB1-208ENST00000558970 GRAPLQ8TC17 118 aaPredicted RBP15.53■□□□□ 0.08
GABPB1-208ENST00000558970 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 HDAC5Q9UQL6 1122 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 CHD4Q14839 1912 aa15.53■□□□□ 0.08
GABPB1-208ENST00000558970 PNMA6EA0A0J9YXQ4 647 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 SRGAP3O43295 1099 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 C21orf2O43822 256 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 ALDH1B1P30837 517 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 HOXA10P31260 410 aaPredicted RBP15.52■□□□□ 0.08
GABPB1-208ENST00000558970 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
GABPB1-208ENST00000558970 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 SIL1Q9H173 461 aa15.52■□□□□ 0.08
GABPB1-208ENST00000558970 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
GABPB1-208ENST00000558970 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
GABPB1-208ENST00000558970 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
GABPB1-208ENST00000558970 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
GABPB1-208ENST00000558970 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
GABPB1-208ENST00000558970 RTL9Q8NET4 1388 aa15.5■□□□□ 0.07
GABPB1-208ENST00000558970 NEFLP07196 543 aa15.5■□□□□ 0.07
GABPB1-208ENST00000558970 YBX3P16989 372 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■□□□□ 11.3
GABPB1-208ENST00000558970 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
GABPB1-208ENST00000558970 RPS8P62241 208 aaKnown RBP15.5■□□□□ 0.07
GABPB1-208ENST00000558970 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
GABPB1-208ENST00000558970 MPHOSPH8Q99549 860 aa15.5■□□□□ 0.07
GABPB1-208ENST00000558970 PUS3Q9BZE2 481 aaKnown RBP15.49■□□□□ 0.07
GABPB1-208ENST00000558970 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
GABPB1-208ENST00000558970 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
GABPB1-208ENST00000558970 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
GABPB1-208ENST00000558970 LDHAL6AQ6ZMR3 332 aa15.48■□□□□ 0.07
GABPB1-208ENST00000558970 BBOX1O75936 387 aa15.47■□□□□ 0.07
GABPB1-208ENST00000558970 RFX5P48382 616 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-208ENST00000558970 ATP8B2P98198 1209 aa15.47■□□□□ 0.07
GABPB1-208ENST00000558970 LTBP1Q14766 1721 aa15.47■□□□□ 0.07
GABPB1-208ENST00000558970 LRRC24Q50LG9 513 aa15.47■□□□□ 0.07
GABPB1-208ENST00000558970 HELBQ8NG08 1087 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms