RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 UBTFL1P0CB47 393 aaPredicted RBP30.66■■■□□ 2.5
ZEB1-214ENST00000558863 RRP1P56182 461 aaKnown RBP30.66■■■□□ 2.5
ZEB1-214ENST00000558863 DALRD3Q5D0E6 543 aaKnown RBP30.66■■■□□ 2.5
ZEB1-214ENST00000558863 DDX46Q7L014 1031 aaKnown RBP30.66■■■□□ 2.5
ZEB1-214ENST00000558863 RLBP1P12271 317 aa30.66■■■□□ 2.5
ZEB1-214ENST00000558863 ITPRIPQ8IWB1 547 aa30.66■■■□□ 2.5
ZEB1-214ENST00000558863 RTL9Q8NET4 1388 aa30.64■■■□□ 2.5
ZEB1-214ENST00000558863 TTLL11Q8NHH1 800 aa30.64■■■□□ 2.5
ZEB1-214ENST00000558863 PANK1Q8TE04 598 aa30.64■■■□□ 2.5
ZEB1-214ENST00000558863 CHMP4BQ9H444 224 aaKnown RBP30.64■■■□□ 2.5
ZEB1-214ENST00000558863 DCAF8L1A6NGE4 600 aa30.63■■■□□ 2.49
ZEB1-214ENST00000558863 CSF1RP07333 972 aa30.63■■■□□ 2.49
ZEB1-214ENST00000558863 FOXO4P98177 505 aa30.62■■■□□ 2.49
ZEB1-214ENST00000558863 MEIS3Q99687 375 aa30.62■■■□□ 2.49
ZEB1-214ENST00000558863 MVPQ14764 893 aaKnown RBP30.61■■■□□ 2.49
ZEB1-214ENST00000558863 SUCLG2Q96I99 432 aa30.61■■■□□ 2.49
ZEB1-214ENST00000558863 BCS1LQ9Y276 419 aa30.61■■■□□ 2.49
ZEB1-214ENST00000558863 BBOX1O75936 387 aa30.6■■■□□ 2.49
ZEB1-214ENST00000558863 PRPF40BQ6NWY9 871 aaKnown RBP30.6■■■□□ 2.49
ZEB1-214ENST00000558863 DDX19BQ9UMR2 479 aa30.6■■■□□ 2.49
ZEB1-214ENST00000558863 GRAPQ13588 217 aa30.59■■■□□ 2.49
ZEB1-214ENST00000558863 TMC4Q7Z404 712 aa30.59■■■□□ 2.49
ZEB1-214ENST00000558863 GRAPLQ8TC17 118 aaPredicted RBP30.59■■■□□ 2.49
ZEB1-214ENST00000558863 GPR162Q16538 588 aa30.58■■■□□ 2.49
ZEB1-214ENST00000558863 CDC5LQ99459 802 aaKnown RBP30.58■■■□□ 2.49
ZEB1-214ENST00000558863 BICC1Q9H694 974 aaKnown RBP30.58■■■□□ 2.49
ZEB1-214ENST00000558863 RABL6Q3YEC7 729 aaPredicted RBP30.57■■■□□ 2.48
ZEB1-214ENST00000558863 SOGA3Q5TF21 947 aa30.57■■■□□ 2.48
ZEB1-214ENST00000558863 LMBR1LQ6UX01 489 aa30.57■■■□□ 2.48
ZEB1-214ENST00000558863 KAZALD1Q96I82 304 aa30.57■■■□□ 2.48
ZEB1-214ENST00000558863 ARFGEF1Q9Y6D6 1849 aa30.57■■■□□ 2.48
ZEB1-214ENST00000558863 ZBTB7BO15156 539 aaPredicted RBP30.56■■■□□ 2.48
ZEB1-214ENST00000558863 GNAI2P04899 355 aa30.56■■■□□ 2.48
ZEB1-214ENST00000558863 EPHA10Q5JZY3 1008 aa30.56■■■□□ 2.48
ZEB1-214ENST00000558863 PELP1Q8IZL8 1130 aaKnown RBP30.56■■■□□ 2.48
ZEB1-214ENST00000558863 GREM2Q9H772 168 aa30.56■■■□□ 2.48
ZEB1-214ENST00000558863 GRIN3BO60391 1043 aa30.55■■■□□ 2.48
ZEB1-214ENST00000558863 TMX4Q9H1E5 349 aaPredicted RBP30.55■■■□□ 2.48
ZEB1-214ENST00000558863 COG6Q9Y2V7 657 aa30.55■■■□□ 2.48
ZEB1-214ENST00000558863 IFIT5Q13325 482 aaKnown RBP30.54■■■□□ 2.48
ZEB1-214ENST00000558863 CC2D2BQ6DHV5 1058 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 CCDC85AQ96PX6 553 aaPredicted RBP30.54■■■□□ 2.48
ZEB1-214ENST00000558863 CHMP3Q9Y3E7 222 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 LRRFIP2Q9Y608 721 aaKnown RBP30.54■■■□□ 2.48
ZEB1-214ENST00000558863 SLX4Q8IY92 1834 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 CACNA1SQ13698 1873 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 ANKRD18BA2A2Z9 1011 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 PPEF1O14829 653 aaPredicted RBP30.54■■■□□ 2.48
ZEB1-214ENST00000558863 ITGA6P23229 1130 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 RPS8P62241 208 aaKnown RBP30.54■■■□□ 2.48
ZEB1-214ENST00000558863 CCDC57Q2TAC2 916 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 FAM161AQ3B820 660 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 GRIPAP1Q4V328 841 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 C20orf194Q5TEA3 1177 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 WWC3Q9ULE0 1092 aa30.54■■■□□ 2.48
ZEB1-214ENST00000558863 YBX3P16989 372 aaKnown RBP eCLIP30.53■■■□□ 2.48
ZEB1-214ENST00000558863 ANKRD18AQ8IVF6 992 aa30.53■■■□□ 2.48
ZEB1-214ENST00000558863 ANKRD44Q8N8A2 993 aa30.53■■■□□ 2.48
ZEB1-214ENST00000558863 SEC31BQ9NQW1 1179 aa30.53■■■□□ 2.48
ZEB1-214ENST00000558863 SUPT16HQ9Y5B9 1047 aaKnown RBP30.52■■■□□ 2.48
ZEB1-214ENST00000558863 C7orf43Q8WVR3 580 aa30.51■■■□□ 2.47
ZEB1-214ENST00000558863 CELF1Q92879 486 aaKnown RBP30.51■■■□□ 2.47
ZEB1-214ENST00000558863 ATP6V0A2Q9Y487 856 aa30.51■■■□□ 2.47
ZEB1-214ENST00000558863 CENPBP07199 599 aaPredicted RBP30.5■■■□□ 2.47
ZEB1-214ENST00000558863 IGHMBP2P38935 993 aaKnown RBP30.5■■■□□ 2.47
ZEB1-214ENST00000558863 SP8Q8IXZ3 490 aa30.5■■■□□ 2.47
ZEB1-214ENST00000558863 C21orf2O43822 256 aa30.49■■■□□ 2.47
ZEB1-214ENST00000558863 CCDC93Q567U6 631 aa30.48■■■□□ 2.47
ZEB1-214ENST00000558863 MTX1Q13505 466 aa30.47■■■□□ 2.47
ZEB1-214ENST00000558863 TAF7LQ5H9L4 462 aa30.47■■■□□ 2.47
ZEB1-214ENST00000558863 RTKN2Q8IZC4 609 aa30.47■■■□□ 2.47
ZEB1-214ENST00000558863 BSDC1Q9NW68 430 aaPredicted RBP30.47■■■□□ 2.47
ZEB1-214ENST00000558863 TAF1P21675 1872 aa30.46■■■□□ 2.47
ZEB1-214ENST00000558863 MPHOSPH8Q99549 860 aa30.46■■■□□ 2.47
ZEB1-214ENST00000558863 ZBTB40Q9NUA8 1239 aa30.46■■■□□ 2.47
ZEB1-214ENST00000558863 ZNF219Q9P2Y4 722 aaPredicted RBP30.45■■■□□ 2.47
ZEB1-214ENST00000558863 LRRC37AA6NMS7 1700 aa30.43■■■□□ 2.46
ZEB1-214ENST00000558863 ARHGAP27Q6ZUM4 889 aa30.42■■■□□ 2.46
ZEB1-214ENST00000558863 LTBP3Q9NS15 1303 aa30.41■■■□□ 2.46
ZEB1-214ENST00000558863 COL4A1P02462 1669 aa30.41■■■□□ 2.46
ZEB1-214ENST00000558863 LDHAL6AQ6ZMR3 332 aa30.41■■■□□ 2.46
ZEB1-214ENST00000558863 SRGAP3O43295 1099 aa30.4■■■□□ 2.46
ZEB1-214ENST00000558863 AAMPQ13685 434 aa30.4■■■□□ 2.46
ZEB1-214ENST00000558863 FBXO3Q9UK99 471 aa30.4■■■□□ 2.46
ZEB1-214ENST00000558863 FER1L6Q2WGJ9 1857 aa30.39■■■□□ 2.46
ZEB1-214ENST00000558863 PSMD1Q99460 953 aa30.39■■■□□ 2.45
ZEB1-214ENST00000558863 C1orf115Q9H7X2 142 aa30.39■■■□□ 2.45
ZEB1-214ENST00000558863 SNED1Q8TER0 1413 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 RFX5P48382 616 aaPredicted RBP30.38■■■□□ 2.45
ZEB1-214ENST00000558863 ATP8B2P98198 1209 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 MPNDQ8N594 471 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 TAOK3Q9H2K8 898 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 CNNM1Q9NRU3 951 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 SPEF2Q9C093 1822 aa30.38■■■□□ 2.45
ZEB1-214ENST00000558863 FKBP4Q02790 459 aaKnown RBP eCLIP30.37■■■□□ 2.45
ZEB1-214ENST00000558863 DPP8Q6V1X1 898 aaPredicted RBP30.37■■■□□ 2.45
ZEB1-214ENST00000558863 RPAP2Q8IXW5 612 aaPredicted RBP30.37■■■□□ 2.45
ZEB1-214ENST00000558863 SUPT20HQ8NEM7 779 aa30.37■■■□□ 2.45
ZEB1-214ENST00000558863 ZNF594Q96JF6 807 aaPredicted RBP30.37■■■□□ 2.45
ZEB1-214ENST00000558863 CRBNQ96SW2 442 aa30.37■■■□□ 2.45
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