RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CCDC85AQ96PX6 553 aaPredicted RBP21.98■■□□□ 1.11
TPM1-214ENST00000558544 PLA2G12BQ9BX93 195 aa21.98■■□□□ 1.11
TPM1-214ENST00000558544 UTRNP46939 3433 aa21.97■■□□□ 1.11
TPM1-214ENST00000558544 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
TPM1-214ENST00000558544 SF3B3Q15393 1217 aaKnown RBP21.97■■□□□ 1.11
TPM1-214ENST00000558544 ITPRIPQ8IWB1 547 aa21.97■■□□□ 1.11
TPM1-214ENST00000558544 RBM17Q96I25 401 aaKnown RBP21.97■■□□□ 1.11
TPM1-214ENST00000558544 MEIS3Q99687 375 aa21.97■■□□□ 1.11
TPM1-214ENST00000558544 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
TPM1-214ENST00000558544 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
TPM1-214ENST00000558544 TTLL6Q8N841 843 aa21.96■■□□□ 1.11
TPM1-214ENST00000558544 HOXA10P31260 410 aaPredicted RBP21.95■■□□□ 1.1
TPM1-214ENST00000558544 CCDC152Q4G0S7 254 aa21.95■■□□□ 1.1
TPM1-214ENST00000558544 EPHA10Q5JZY3 1008 aa21.95■■□□□ 1.1
TPM1-214ENST00000558544 C20orf194Q5TEA3 1177 aa21.95■■□□□ 1.1
TPM1-214ENST00000558544 CNKSR1Q969H4 720 aa21.95■■□□□ 1.1
TPM1-214ENST00000558544 UBTFL1P0CB47 393 aaPredicted RBP21.94■■□□□ 1.1
TPM1-214ENST00000558544 FOXO4P98177 505 aa21.94■■□□□ 1.1
TPM1-214ENST00000558544 PRPF40BQ6NWY9 871 aaKnown RBP21.94■■□□□ 1.1
TPM1-214ENST00000558544 DDX46Q7L014 1031 aaKnown RBP21.94■■□□□ 1.1
TPM1-214ENST00000558544 TTLL11Q8NHH1 800 aa21.94■■□□□ 1.1
TPM1-214ENST00000558544 KAZALD1Q96I82 304 aa21.94■■□□□ 1.1
TPM1-214ENST00000558544 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
TPM1-214ENST00000558544 ALDH1B1P30837 517 aa21.93■■□□□ 1.1
TPM1-214ENST00000558544 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
TPM1-214ENST00000558544 LRRC37AA6NMS7 1700 aa21.93■■□□□ 1.1
TPM1-214ENST00000558544 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 GPR162Q16538 588 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
TPM1-214ENST00000558544 GREM2Q9H772 168 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 SEC31BQ9NQW1 1179 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
TPM1-214ENST00000558544 COG6Q9Y2V7 657 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
TPM1-214ENST00000558544 CSF1RP07333 972 aa21.91■■□□□ 1.1
TPM1-214ENST00000558544 GNAI3P08754 354 aa21.91■■□□□ 1.1
TPM1-214ENST00000558544 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
TPM1-214ENST00000558544 CHMP3Q9Y3E7 222 aa21.91■■□□□ 1.1
TPM1-214ENST00000558544 GRAPQ13588 217 aa21.9■■□□□ 1.1
TPM1-214ENST00000558544 MVPQ14764 893 aaKnown RBP21.9■■□□□ 1.1
TPM1-214ENST00000558544 LMBR1LQ6UX01 489 aa21.9■■□□□ 1.1
TPM1-214ENST00000558544 GRAPLQ8TC17 118 aaPredicted RBP21.9■■□□□ 1.1
TPM1-214ENST00000558544 CELF1Q92879 486 aaKnown RBP21.9■■□□□ 1.1
TPM1-214ENST00000558544 LRRFIP2Q9Y608 721 aaKnown RBP21.9■■□□□ 1.1
TPM1-214ENST00000558544 RTL9Q8NET4 1388 aa21.9■■□□□ 1.1
TPM1-214ENST00000558544 PPEF1O14829 653 aaPredicted RBP21.89■■□□□ 1.1
TPM1-214ENST00000558544 ANKRD44Q8N8A2 993 aa21.89■■□□□ 1.1
TPM1-214ENST00000558544 A0A1B0GUL6 1792 aa21.89■■□□□ 1.09
TPM1-214ENST00000558544 CCDC88AQ3V6T2 1871 aa21.89■■□□□ 1.09
TPM1-214ENST00000558544 C21orf2O43822 256 aa21.88■■□□□ 1.09
TPM1-214ENST00000558544 SLC51AQ86UW1 340 aa21.88■■□□□ 1.09
TPM1-214ENST00000558544 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
TPM1-214ENST00000558544 ZBTB7BO15156 539 aaPredicted RBP21.87■■□□□ 1.09
TPM1-214ENST00000558544 ITGA6P23229 1130 aa21.87■■□□□ 1.09
TPM1-214ENST00000558544 RABL6Q3YEC7 729 aaPredicted RBP21.87■■□□□ 1.09
TPM1-214ENST00000558544 DDX19BQ9UMR2 479 aa21.87■■□□□ 1.09
TPM1-214ENST00000558544 OLFM4Q6UX06 510 aa21.87■■□□□ 1.09
TPM1-214ENST00000558544 CDC5LQ99459 802 aaKnown RBP21.87■■□□□ 1.09
TPM1-214ENST00000558544 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
TPM1-214ENST00000558544 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
TPM1-214ENST00000558544 GNAI2P04899 355 aa21.86■■□□□ 1.09
TPM1-214ENST00000558544 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
TPM1-214ENST00000558544 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
TPM1-214ENST00000558544 SBF1O95248 1867 aa21.85■■□□□ 1.09
TPM1-214ENST00000558544 ANKRD18BA2A2Z9 1011 aa21.85■■□□□ 1.09
TPM1-214ENST00000558544 BBOX1O75936 387 aa21.85■■□□□ 1.09
TPM1-214ENST00000558544 RPS8P62241 208 aaKnown RBP21.85■■□□□ 1.09
TPM1-214ENST00000558544 IFIT5Q13325 482 aaKnown RBP21.85■■□□□ 1.09
TPM1-214ENST00000558544 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
TPM1-214ENST00000558544 C7orf43Q8WVR3 580 aa21.85■■□□□ 1.09
TPM1-214ENST00000558544 CHD4Q14839 1912 aa21.84■■□□□ 1.09
TPM1-214ENST00000558544 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
TPM1-214ENST00000558544 LTBP1Q14766 1721 aa21.83■■□□□ 1.09
TPM1-214ENST00000558544 GRIN3BO60391 1043 aa21.83■■□□□ 1.08
TPM1-214ENST00000558544 ATP6V0A2Q9Y487 856 aa21.83■■□□□ 1.08
TPM1-214ENST00000558544 SNED1Q8TER0 1413 aa21.82■■□□□ 1.08
TPM1-214ENST00000558544 IGHMBP2P38935 993 aaKnown RBP21.82■■□□□ 1.08
TPM1-214ENST00000558544 CCDC93Q567U6 631 aa21.82■■□□□ 1.08
TPM1-214ENST00000558544 SOGA3Q5TF21 947 aa21.82■■□□□ 1.08
TPM1-214ENST00000558544 ARHGAP27Q6ZUM4 889 aa21.82■■□□□ 1.08
TPM1-214ENST00000558544 TMC4Q7Z404 712 aa21.82■■□□□ 1.08
TPM1-214ENST00000558544 ZNF594Q96JF6 807 aaPredicted RBP21.82■■□□□ 1.08
TPM1-214ENST00000558544 TAF7LQ5H9L4 462 aa21.81■■□□□ 1.08
TPM1-214ENST00000558544 SP8Q8IXZ3 490 aa21.81■■□□□ 1.08
TPM1-214ENST00000558544 CRBNQ96SW2 442 aa21.8■■□□□ 1.08
TPM1-214ENST00000558544 MPHOSPH8Q99549 860 aa21.8■■□□□ 1.08
TPM1-214ENST00000558544 TMX4Q9H1E5 349 aaPredicted RBP21.8■■□□□ 1.08
TPM1-214ENST00000558544 DICER1Q9UPY3 1922 aaKnown RBP21.8■■□□□ 1.08
TPM1-214ENST00000558544 DUOX1Q9NRD9 1551 aa21.79■■□□□ 1.08
TPM1-214ENST00000558544 RASSF7Q02833 373 aa21.79■■□□□ 1.08
TPM1-214ENST00000558544 CC2D2BQ6DHV5 1058 aa21.79■■□□□ 1.08
TPM1-214ENST00000558544 CHMP4BQ9H444 224 aaKnown RBP21.79■■□□□ 1.08
TPM1-214ENST00000558544 ZBTB40Q9NUA8 1239 aa21.79■■□□□ 1.08
TPM1-214ENST00000558544 BSDC1Q9NW68 430 aaPredicted RBP21.79■■□□□ 1.08
TPM1-214ENST00000558544 NFKBIEO00221 500 aa21.78■■□□□ 1.08
TPM1-214ENST00000558544 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
TPM1-214ENST00000558544 SRGAP3O43295 1099 aa21.77■■□□□ 1.08
TPM1-214ENST00000558544 RFX5P48382 616 aaPredicted RBP21.77■■□□□ 1.08
TPM1-214ENST00000558544 MTX1Q13505 466 aa21.77■■□□□ 1.08
TPM1-214ENST00000558544 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms