RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 DNAAF4Q8WXU2 420 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 JARID2Q92833 1246 aaPredicted RBP28.66■■■□□ 2.18
PABPN1-206ENST00000556809 NMRK2Q9NPI5 230 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 COL4A1P02462 1669 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 CDHR2Q9BYE9 1310 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 C1QTNF8P60827 252 aa28.65■■■□□ 2.18
PABPN1-206ENST00000556809 MRPL50Q8N5N7 158 aaKnown RBP28.65■■■□□ 2.18
PABPN1-206ENST00000556809 ZNF277Q9NRM2 450 aaPredicted RBP28.65■■■□□ 2.18
PABPN1-206ENST00000556809 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
PABPN1-206ENST00000556809 GLTPD2A6NH11 291 aa28.64■■■□□ 2.18
PABPN1-206ENST00000556809 SP8Q8IXZ3 490 aa28.64■■■□□ 2.18
PABPN1-206ENST00000556809 YTHDC1Q96MU7 727 aaKnown RBP28.64■■■□□ 2.18
PABPN1-206ENST00000556809 LRRC37AA6NMS7 1700 aa28.63■■■□□ 2.17
PABPN1-206ENST00000556809 HSP90B1P14625 803 aaKnown RBP28.63■■■□□ 2.17
PABPN1-206ENST00000556809 BCL2L13Q9BXK5 485 aa28.63■■■□□ 2.17
PABPN1-206ENST00000556809 PDE8AO60658 829 aa28.62■■■□□ 2.17
PABPN1-206ENST00000556809 LINS1Q8NG48 757 aa28.62■■■□□ 2.17
PABPN1-206ENST00000556809 CELF1Q92879 486 aaKnown RBP28.62■■■□□ 2.17
PABPN1-206ENST00000556809 SMC4Q9NTJ3 1288 aa28.62■■■□□ 2.17
PABPN1-206ENST00000556809 H7C1W4 665 aa28.61■■■□□ 2.17
PABPN1-206ENST00000556809 IARSP41252 1262 aaKnown RBP28.61■■■□□ 2.17
PABPN1-206ENST00000556809 GCKRQ14397 625 aa28.61■■■□□ 2.17
PABPN1-206ENST00000556809 MYH3P11055 1940 aa28.61■■■□□ 2.17
PABPN1-206ENST00000556809 F6X3S4 739 aa28.6■■■□□ 2.17
PABPN1-206ENST00000556809 TMC4Q7Z404 712 aa28.6■■■□□ 2.17
PABPN1-206ENST00000556809 COL4A5P29400 1685 aa28.59■■■□□ 2.17
PABPN1-206ENST00000556809 RARSP54136 660 aaKnown RBP28.59■■■□□ 2.17
PABPN1-206ENST00000556809 RRAGCQ9HB90 399 aa28.59■■■□□ 2.17
PABPN1-206ENST00000556809 WDR90Q96KV7 1748 aa28.59■■■□□ 2.17
PABPN1-206ENST00000556809 CASP7P55210 303 aa28.58■■■□□ 2.17
PABPN1-206ENST00000556809 BEND3Q5T5X7 828 aa28.58■■■□□ 2.17
PABPN1-206ENST00000556809 RTFDC1Q9BY42 306 aaPredicted RBP28.58■■■□□ 2.17
PABPN1-206ENST00000556809 DPY19L2Q6NUT2 758 aa28.57■■■□□ 2.16
PABPN1-206ENST00000556809 TMX4Q9H1E5 349 aaPredicted RBP28.57■■■□□ 2.16
PABPN1-206ENST00000556809 SEC31BQ9NQW1 1179 aa28.57■■■□□ 2.16
PABPN1-206ENST00000556809 PTPRCP08575 1304 aa28.56■■■□□ 2.16
PABPN1-206ENST00000556809 CCDC152Q4G0S7 254 aa28.56■■■□□ 2.16
PABPN1-206ENST00000556809 DUOX1Q9NRD9 1551 aa28.55■■■□□ 2.16
PABPN1-206ENST00000556809 POTECB2RU33 542 aa28.55■■■□□ 2.16
PABPN1-206ENST00000556809 FZD9O00144 591 aa28.55■■■□□ 2.16
PABPN1-206ENST00000556809 RPS8P62241 208 aaKnown RBP28.55■■■□□ 2.16
PABPN1-206ENST00000556809 UBE3BQ7Z3V4 1068 aa28.55■■■□□ 2.16
PABPN1-206ENST00000556809 BRPF1P55201 1214 aaPredicted RBP28.54■■■□□ 2.16
PABPN1-206ENST00000556809 CTSWP56202 376 aa28.54■■■□□ 2.16
PABPN1-206ENST00000556809 MPNDQ8N594 471 aa28.54■■■□□ 2.16
PABPN1-206ENST00000556809 TTLL11Q8NHH1 800 aa28.54■■■□□ 2.16
PABPN1-206ENST00000556809 PLA2G12BQ9BX93 195 aa28.54■■■□□ 2.16
PABPN1-206ENST00000556809 LTBP1Q14766 1721 aa28.54■■■□□ 2.16
PABPN1-206ENST00000556809 TOMM70O94826 608 aa28.53■■■□□ 2.16
PABPN1-206ENST00000556809 VPS33BQ9H267 617 aa28.53■■■□□ 2.16
PABPN1-206ENST00000556809 DDNO94850 711 aaPredicted RBP28.52■■■□□ 2.16
PABPN1-206ENST00000556809 DPP8Q6V1X1 898 aaPredicted RBP28.52■■■□□ 2.16
PABPN1-206ENST00000556809 CCDC85AQ96PX6 553 aaPredicted RBP28.52■■■□□ 2.16
PABPN1-206ENST00000556809 RTL9Q8NET4 1388 aa28.51■■■□□ 2.16
PABPN1-206ENST00000556809 ZNF541Q9H0D2 1346 aa28.51■■■□□ 2.15
PABPN1-206ENST00000556809 SUPT20HQ8NEM7 779 aa28.51■■■□□ 2.15
PABPN1-206ENST00000556809 JDP2Q8WYK2 163 aa28.51■■■□□ 2.15
PABPN1-206ENST00000556809 VEGFAP15692 232 aaPredicted RBP28.5■■■□□ 2.15
PABPN1-206ENST00000556809 LARGE2Q8N3Y3 721 aa28.5■■■□□ 2.15
PABPN1-206ENST00000556809 NOB1Q9ULX3 412 aaKnown RBP28.5■■■□□ 2.15
PABPN1-206ENST00000556809 KIF16BQ96L93 1317 aa28.49■■■□□ 2.15
PABPN1-206ENST00000556809 PPIP5K2O43314 1243 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 BCAR3O75815 825 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 ALDH1L1O75891 902 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 CSF1RP07333 972 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 AOC3Q16853 763 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 L3MBTL3Q96JM7 780 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-206ENST00000556809 GREM2Q9H772 168 aa28.48■■■□□ 2.15
PABPN1-206ENST00000556809 GPSM2P81274 684 aa28.47■■■□□ 2.15
PABPN1-206ENST00000556809 KIAA2012Q0VF49 1180 aa28.47■■■□□ 2.15
PABPN1-206ENST00000556809 SLC4A10Q6U841 1118 aa28.47■■■□□ 2.15
PABPN1-206ENST00000556809 RBM46Q8TBY0 533 aaKnown RBP28.47■■■□□ 2.15
PABPN1-206ENST00000556809 SCN4AP35499 1836 aa28.47■■■□□ 2.15
PABPN1-206ENST00000556809 SRCIN1Q9C0H9 1055 aa28.46■■■□□ 2.15
PABPN1-206ENST00000556809 NSFL1CQ9UNZ2 370 aaKnown RBP28.46■■■□□ 2.15
PABPN1-206ENST00000556809 GRM8O00222 908 aa28.45■■■□□ 2.14
PABPN1-206ENST00000556809 PODXL2Q9NZ53 605 aa28.45■■■□□ 2.14
PABPN1-206ENST00000556809 SPEF2Q9C093 1822 aa28.45■■■□□ 2.14
PABPN1-206ENST00000556809 FOXO4P98177 505 aa28.44■■■□□ 2.14
PABPN1-206ENST00000556809 ANKRD18AQ8IVF6 992 aa28.44■■■□□ 2.14
PABPN1-206ENST00000556809 C16orf71Q8IYS4 520 aaPredicted RBP28.44■■■□□ 2.14
PABPN1-206ENST00000556809 CDC5LQ99459 802 aaKnown RBP28.44■■■□□ 2.14
PABPN1-206ENST00000556809 API5Q9BZZ5 524 aaKnown RBP28.44■■■□□ 2.14
PABPN1-206ENST00000556809 POLLQ9UGP5 575 aa28.44■■■□□ 2.14
PABPN1-206ENST00000556809 NIM1KQ8IY84 436 aa28.43■■■□□ 2.14
PABPN1-206ENST00000556809 GPC2Q8N158 579 aa28.43■■■□□ 2.14
PABPN1-206ENST00000556809 ARHGAP45Q92619 1136 aa28.43■■■□□ 2.14
PABPN1-206ENST00000556809 EIF6P56537 245 aaKnown RBP28.42■■■□□ 2.14
PABPN1-206ENST00000556809 IPO8O15397 1037 aaKnown RBP28.41■■■□□ 2.14
PABPN1-206ENST00000556809 TBC1D16Q8TBP0 767 aa28.41■■■□□ 2.14
PABPN1-206ENST00000556809 FRAT1Q92837 279 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-206ENST00000556809 BSDC1Q9NW68 430 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-206ENST00000556809 ZNRF3Q9ULT6 936 aa28.41■■■□□ 2.14
PABPN1-206ENST00000556809 UTYO14607 1347 aa28.41■■■□□ 2.14
PABPN1-206ENST00000556809 ITGA6P23229 1130 aa28.4■■■□□ 2.14
PABPN1-206ENST00000556809 FAM161AQ3B820 660 aa28.4■■■□□ 2.14
PABPN1-206ENST00000556809 EPHA10Q5JZY3 1008 aa28.4■■■□□ 2.14
PABPN1-206ENST00000556809 C9orf78Q9NZ63 289 aaPredicted RBP28.4■■■□□ 2.14
PABPN1-206ENST00000556809 WASHC4Q2M389 1173 aa28.39■■■□□ 2.14
PABPN1-206ENST00000556809 IQCA1LA6NCM1 817 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms