RNA–Protein interactions for RNA: ENST00000555663.1

AC104390.1-201, humanhuman

BASIC

Gene AC104390.1, Length 520 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104390.1-201ENST00000555663 CHRNA5P30532 468 aa23.25■■□□□ 1.31
AC104390.1-201ENST00000555663 HOXA10P31260 410 aaPredicted RBP23.25■■□□□ 1.31
AC104390.1-201ENST00000555663 EPHA10Q5JZY3 1008 aa23.25■■□□□ 1.31
AC104390.1-201ENST00000555663 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
AC104390.1-201ENST00000555663 DLEC1Q9Y238 1755 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 A0A0G2JLW4 131 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 KCNA3P22001 575 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 RABL6Q3YEC7 729 aaPredicted RBP23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 CCDC152Q4G0S7 254 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 RPGRQ92834 1020 aaKnown RBP23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 ZBTB40Q9NUA8 1239 aa23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 LRRFIP2Q9Y608 721 aaKnown RBP23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 COL11A2P13942 1736 aaPredicted RBP23.24■■□□□ 1.31
AC104390.1-201ENST00000555663 NLGN2Q8NFZ4 835 aa23.23■■□□□ 1.31
AC104390.1-201ENST00000555663 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
AC104390.1-201ENST00000555663 LMBR1LQ6UX01 489 aa23.22■■□□□ 1.31
AC104390.1-201ENST00000555663 ANKRD44Q8N8A2 993 aa23.22■■□□□ 1.31
AC104390.1-201ENST00000555663 CRAMP1Q96RY5 1269 aa23.22■■□□□ 1.31
AC104390.1-201ENST00000555663 CRBNQ96SW2 442 aa23.22■■□□□ 1.31
AC104390.1-201ENST00000555663 RTL9Q8NET4 1388 aa23.22■■□□□ 1.31
AC104390.1-201ENST00000555663 ALDH1B1P30837 517 aa23.21■■□□□ 1.31
AC104390.1-201ENST00000555663 DDX46Q7L014 1031 aaKnown RBP23.21■■□□□ 1.31
AC104390.1-201ENST00000555663 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
AC104390.1-201ENST00000555663 ZNF622Q969S3 477 aaKnown RBP eCLIP23.2■■□□□ 1.3
AC104390.1-201ENST00000555663 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
AC104390.1-201ENST00000555663 CCDC85AQ96PX6 553 aaPredicted RBP23.19■■□□□ 1.3
AC104390.1-201ENST00000555663 GREM2Q9H772 168 aa23.19■■□□□ 1.3
AC104390.1-201ENST00000555663 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
AC104390.1-201ENST00000555663 MTX1Q13505 466 aa23.18■■□□□ 1.3
AC104390.1-201ENST00000555663 AAMPQ13685 434 aa23.18■■□□□ 1.3
AC104390.1-201ENST00000555663 TTLL6Q8N841 843 aa23.18■■□□□ 1.3
AC104390.1-201ENST00000555663 ITGA6P23229 1130 aa23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 IFIT5Q13325 482 aaKnown RBP23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 GRAPQ13588 217 aa23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 FAM161AQ3B820 660 aa23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 SEC31BQ9NQW1 1179 aa23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 CHMP3Q9Y3E7 222 aa23.17■■□□□ 1.3
AC104390.1-201ENST00000555663 ANKRD18BA2A2Z9 1011 aa23.16■■□□□ 1.3
AC104390.1-201ENST00000555663 CCDC57Q2TAC2 916 aa23.16■■□□□ 1.3
AC104390.1-201ENST00000555663 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
AC104390.1-201ENST00000555663 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
AC104390.1-201ENST00000555663 BBOX1O75936 387 aa23.15■■□□□ 1.3
AC104390.1-201ENST00000555663 ATP8B2P98198 1209 aa23.15■■□□□ 1.3
AC104390.1-201ENST00000555663 TAF1P21675 1872 aa23.15■■□□□ 1.3
AC104390.1-201ENST00000555663 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.29
AC104390.1-201ENST00000555663 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
AC104390.1-201ENST00000555663 RPAP2Q8IXW5 612 aaPredicted RBP23.14■■□□□ 1.29
AC104390.1-201ENST00000555663 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
AC104390.1-201ENST00000555663 CELF1Q92879 486 aaKnown RBP23.14■■□□□ 1.29
AC104390.1-201ENST00000555663 SLX4Q8IY92 1834 aa23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 PRPF40BQ6NWY9 871 aaKnown RBP23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 CEP85Q6P2H3 762 aa23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 TMC4Q7Z404 712 aa23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 ANKRD18AQ8IVF6 992 aa23.13■■□□□ 1.29
AC104390.1-201ENST00000555663 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
AC104390.1-201ENST00000555663 RFX5P48382 616 aaPredicted RBP23.12■■□□□ 1.29
AC104390.1-201ENST00000555663 CACNA1SQ13698 1873 aa23.12■■□□□ 1.29
AC104390.1-201ENST00000555663 IGHMBP2P38935 993 aaKnown RBP23.11■■□□□ 1.29
AC104390.1-201ENST00000555663 COL4A1P02462 1669 aa23.11■■□□□ 1.29
AC104390.1-201ENST00000555663 PNMA6EA0A0J9YXQ4 647 aa23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 POLA2Q14181 598 aa23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 C7orf43Q8WVR3 580 aa23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
AC104390.1-201ENST00000555663 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 MPHOSPH8Q99549 860 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 BCS1LQ9Y276 419 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 ATP6V0A2Q9Y487 856 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
AC104390.1-201ENST00000555663 PTPN12Q05209 780 aaKnown RBP23.08■■□□□ 1.29
AC104390.1-201ENST00000555663 ZNF594Q96JF6 807 aaPredicted RBP23.08■■□□□ 1.29
AC104390.1-201ENST00000555663 COPRSQ9NQ92 184 aa23.08■■□□□ 1.29
AC104390.1-201ENST00000555663 CC2D2BQ6DHV5 1058 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 LDHAL6AQ6ZMR3 332 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 FBXO3Q9UK99 471 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 WWC3Q9ULE0 1092 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 SPEF2Q9C093 1822 aa23.07■■□□□ 1.28
AC104390.1-201ENST00000555663 C21orf2O43822 256 aa23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 HMMRO75330 724 aa23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 NEFLP07196 543 aa23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 PCDHB15Q9Y5E8 787 aa23.06■■□□□ 1.28
AC104390.1-201ENST00000555663 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
AC104390.1-201ENST00000555663 GRIPAP1Q4V328 841 aa23.05■■□□□ 1.28
AC104390.1-201ENST00000555663 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
AC104390.1-201ENST00000555663 CNNM1Q9NRU3 951 aa23.04■■□□□ 1.28
AC104390.1-201ENST00000555663 MINPP1Q9UNW1 487 aa23.04■■□□□ 1.28
AC104390.1-201ENST00000555663 RIPOR2Q9Y4F9 1068 aa23.04■■□□□ 1.28
AC104390.1-201ENST00000555663 EYA2O00167 538 aa23.03■■□□□ 1.28
AC104390.1-201ENST00000555663 CIAO1O76071 339 aa23.03■■□□□ 1.28
AC104390.1-201ENST00000555663 PUS3Q9BZE2 481 aaKnown RBP23.03■■□□□ 1.28
AC104390.1-201ENST00000555663 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms