RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 MPNDQ8N594 471 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
VRK1-204ENST00000555351 CDHR2Q9BYE9 1310 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 VAMP4O75379 141 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 DPP8Q6V1X1 898 aaPredicted RBP15.18■□□□□ 0.02
VRK1-204ENST00000555351 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
VRK1-204ENST00000555351 HACL1Q9UJ83 578 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 COL4A5P29400 1685 aa15.18■□□□□ 0.02
VRK1-204ENST00000555351 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 PDE8AO60658 829 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
VRK1-204ENST00000555351 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
VRK1-204ENST00000555351 TCERG1O14776 1098 aaKnown RBP15.16■□□□□ 0.02
VRK1-204ENST00000555351 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
VRK1-204ENST00000555351 FLIIQ13045 1269 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 ZNRF3Q9ULT6 936 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 CEP350Q5VT06 3117 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
VRK1-204ENST00000555351 TAF1P21675 1872 aa15.15■□□□□ 0.02
VRK1-204ENST00000555351 IGKV5-2P06315 115 aa15.15■□□□□ 0.02
VRK1-204ENST00000555351 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
VRK1-204ENST00000555351 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
VRK1-204ENST00000555351 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
VRK1-204ENST00000555351 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
VRK1-204ENST00000555351 EPHX2P34913 555 aa15.14■□□□□ 0.01
VRK1-204ENST00000555351 AOC3Q16853 763 aa15.14■□□□□ 0.01
VRK1-204ENST00000555351 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
VRK1-204ENST00000555351 G2E3Q7L622 706 aa15.14■□□□□ 0.01
VRK1-204ENST00000555351 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
VRK1-204ENST00000555351 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
VRK1-204ENST00000555351 NEURL1BA8MQ27 555 aa15.13■□□□□ 0.01
VRK1-204ENST00000555351 LMOD1P29536 600 aaPredicted RBP15.13■□□□□ 0.01
VRK1-204ENST00000555351 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
VRK1-204ENST00000555351 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
VRK1-204ENST00000555351 MYH3P11055 1940 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 H7C1W4 665 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
VRK1-204ENST00000555351 TNIP1Q15025 636 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 SLC51AQ86UW1 340 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 KLRG1Q96E93 195 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 EYA3Q99504 573 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
VRK1-204ENST00000555351 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
VRK1-204ENST00000555351 CCER2I3L3R5 266 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 SCNN1DP51172 638 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 CTSWP56202 376 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 CXCL9Q07325 125 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 GCKRQ14397 625 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 USP50Q70EL3 339 aaPredicted RBP15.11■□□□□ 0.01
VRK1-204ENST00000555351 JMYQ8N9B5 988 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 ZNF428Q96B54 188 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 NSFL1CQ9UNZ2 370 aaKnown RBP15.11■□□□□ 0.01
VRK1-204ENST00000555351 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
VRK1-204ENST00000555351 COL4A1P02462 1669 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 POTEJP0CG39 1038 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
VRK1-204ENST00000555351 CIAPIN1Q6FI81 312 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 TTLL11Q8NHH1 800 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
VRK1-204ENST00000555351 PASKQ96RG2 1323 aa15.1■□□□□ 0.01
VRK1-204ENST00000555351 E9PSI1 815 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 ITGBL1O95965 494 aaPredicted RBP15.09■□□□□ 0.01
VRK1-204ENST00000555351 GPSM2P81274 684 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 ANKRD18AQ8IVF6 992 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 POLLQ9UGP5 575 aa15.09■□□□□ 0.01
VRK1-204ENST00000555351 C6orf229H3BNL8 230 aa15.08■□□□□ 0
VRK1-204ENST00000555351 CASP7P55210 303 aa15.08■□□□□ 0
VRK1-204ENST00000555351 EAPPQ56P03 285 aaPredicted RBP15.08■□□□□ 0
VRK1-204ENST00000555351 UBE3BQ7Z3V4 1068 aa15.08■□□□□ 0
VRK1-204ENST00000555351 TBC1D16Q8TBP0 767 aa15.08■□□□□ 0
VRK1-204ENST00000555351 ADARB2Q9NS39 739 aaKnown RBP15.08■□□□□ 0
VRK1-204ENST00000555351 XDHP47989 1333 aa15.08■□□□□ 0
VRK1-204ENST00000555351 CSF1RP07333 972 aa15.07■□□□□ 0
VRK1-204ENST00000555351 EPS15P42566 896 aa15.07■□□□□ 0
VRK1-204ENST00000555351 DPF2Q92785 391 aa15.07■□□□□ 0
VRK1-204ENST00000555351 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
VRK1-204ENST00000555351 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
VRK1-204ENST00000555351 GGA1Q9UJY5 639 aa15.07■□□□□ 0
VRK1-204ENST00000555351 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
VRK1-204ENST00000555351 YDJCA8MPS7 323 aa15.06■□□□□ 0
VRK1-204ENST00000555351 RPS12P25398 132 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms