RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 WASHC4Q2M389 1173 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 TWISTNBQ3B726 338 aaPredicted RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 CCDC152Q4G0S7 254 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 KSR2Q6VAB6 950 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 MYD88Q99836 296 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 PHAXQ9H814 394 aaKnown RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 TNRC6CQ9HCJ0 1690 aaKnown RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 SBF1O95248 1867 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 ANKRD31Q8N7Z5 1873 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 TMEM88BA6NKF7 163 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 H7C1D1 291 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-205ENST00000553904 IFFO2Q5TF58 517 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 ADARB2Q9NS39 739 aaKnown RBP8.35□□□□□ -1.07
FOXN3-205ENST00000553904 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
FOXN3-205ENST00000553904 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 FER1L6Q2WGJ9 1857 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 PI4KAP2A4QPH2 592 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
FOXN3-205ENST00000553904 HTRA3P83110 453 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 CXCL9Q07325 125 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 PI4KAP1Q8N8J0 262 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
FOXN3-205ENST00000553904 CDC5LQ99459 802 aaKnown RBP8.34□□□□□ -1.07
FOXN3-205ENST00000553904 MYH16Q9H6N6 1097 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
FOXN3-205ENST00000553904 CDHR2Q9BYE9 1310 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 POTEIP0CG38 1075 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 EPS15P42566 896 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 ANKRD18AQ8IVF6 992 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 DPF2Q92785 391 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 CELF1Q92879 486 aaKnown RBP8.33□□□□□ -1.08
FOXN3-205ENST00000553904 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
FOXN3-205ENST00000553904 GPRC5DQ9NZD1 345 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 NUP98P52948 1817 aa8.33□□□□□ -1.08
FOXN3-205ENST00000553904 PASKQ96RG2 1323 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-205ENST00000553904 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 RAD17O75943 681 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 RPS12P25398 132 aaKnown RBP8.32□□□□□ -1.08
FOXN3-205ENST00000553904 SCNN1DP51172 638 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-205ENST00000553904 FAM9BQ8IZU0 186 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 CNOT7Q9UIV1 285 aaKnown RBP8.32□□□□□ -1.08
FOXN3-205ENST00000553904 GGA1Q9UJY5 639 aa8.32□□□□□ -1.08
FOXN3-205ENST00000553904 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-205ENST00000553904 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 VAMP4O75379 141 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 ECE1P42892 770 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 GPSM2P81274 684 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 FKBP5Q13451 457 aaPredicted RBP8.31□□□□□ -1.08
FOXN3-205ENST00000553904 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 TBC1D16Q8TBP0 767 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 AIDAQ96BJ3 306 aa8.31□□□□□ -1.08
FOXN3-205ENST00000553904 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
FOXN3-205ENST00000553904 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
FOXN3-205ENST00000553904 ABT1Q9ULW3 272 aaKnown RBP8.31□□□□□ -1.08
FOXN3-205ENST00000553904 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 TIAM2Q8IVF5 1701 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 H7C1W4 665 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
FOXN3-205ENST00000553904 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
FOXN3-205ENST00000553904 CTSWP56202 376 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 MAP2K1Q02750 393 aaPredicted RBP8.3□□□□□ -1.08
FOXN3-205ENST00000553904 FLIIQ13045 1269 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 MPHOSPH8Q99549 860 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 SEC31BQ9NQW1 1179 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 POLLQ9UGP5 575 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 DICER1Q9UPY3 1922 aaKnown RBP8.3□□□□□ -1.08
FOXN3-205ENST00000553904 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
FOXN3-205ENST00000553904 XDHP47989 1333 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 SCN4AP35499 1836 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 ECE2O60344 883 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 UFL1O94874 794 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms