RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
GCN1-208ENST00000551549 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
GCN1-208ENST00000551549 MPNDQ8N594 471 aa12.55□□□□□ -0.4
GCN1-208ENST00000551549 ZBTB38Q8NAP3 1195 aaPredicted RBP12.55□□□□□ -0.4
GCN1-208ENST00000551549 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
GCN1-208ENST00000551549 ANKRD36CQ5JPF3 1778 aa12.55□□□□□ -0.4
GCN1-208ENST00000551549 DDX58O95786 925 aaKnown RBP12.54□□□□□ -0.4
GCN1-208ENST00000551549 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
GCN1-208ENST00000551549 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 METTL22Q9BUU2 404 aaPredicted RBP12.54□□□□□ -0.4
GCN1-208ENST00000551549 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 VPS33BQ9H267 617 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
GCN1-208ENST00000551549 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 IL16Q14005 1332 aa12.54□□□□□ -0.4
GCN1-208ENST00000551549 PI4KAP2A4QPH2 592 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 EPS15P42566 896 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 SCNN1DP51172 638 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
GCN1-208ENST00000551549 G2E3Q7L622 706 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
GCN1-208ENST00000551549 PI4KAP1Q8N8J0 262 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 ZNRF3Q9ULT6 936 aa12.53□□□□□ -0.4
GCN1-208ENST00000551549 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
GCN1-208ENST00000551549 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.41
GCN1-208ENST00000551549 GPSM2P81274 684 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 CXCL9Q07325 125 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 MAP1SQ66K74 1059 aaPredicted RBP12.52□□□□□ -0.41
GCN1-208ENST00000551549 KSR2Q6VAB6 950 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 SEC31BQ9NQW1 1179 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
GCN1-208ENST00000551549 LAMB2P55268 1798 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 IGKV5-2P06315 115 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
GCN1-208ENST00000551549 RPS8P62241 208 aaKnown RBP12.51□□□□□ -0.41
GCN1-208ENST00000551549 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 CNTROBQ8N137 903 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
GCN1-208ENST00000551549 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
GCN1-208ENST00000551549 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
GCN1-208ENST00000551549 COL4A1P02462 1669 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 SCN4AP35499 1836 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 TAF1P21675 1872 aa12.51□□□□□ -0.41
GCN1-208ENST00000551549 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
GCN1-208ENST00000551549 PDE8AO60658 829 aa12.5□□□□□ -0.41
GCN1-208ENST00000551549 RAD17O75943 681 aa12.5□□□□□ -0.41
GCN1-208ENST00000551549 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
GCN1-208ENST00000551549 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
GCN1-208ENST00000551549 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
GCN1-208ENST00000551549 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
GCN1-208ENST00000551549 DDX60Q8IY21 1712 aaKnown RBP12.5□□□□□ -0.41
GCN1-208ENST00000551549 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 VAMP4O75379 141 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
GCN1-208ENST00000551549 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
GCN1-208ENST00000551549 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
GCN1-208ENST00000551549 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
GCN1-208ENST00000551549 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 FLIIQ13045 1269 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 TNIP1Q15025 636 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 USP50Q70EL3 339 aaPredicted RBP12.48□□□□□ -0.41
GCN1-208ENST00000551549 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
GCN1-208ENST00000551549 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 SHTN1A0MZ66 631 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 CTSWP56202 376 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
GCN1-208ENST00000551549 NEXNQ0ZGT2 675 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
GCN1-208ENST00000551549 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
GCN1-208ENST00000551549 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 TRAF5O00463 557 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 PSMD14O00487 310 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
GCN1-208ENST00000551549 TTLL11Q8NHH1 800 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 GREM2Q9H772 168 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
GCN1-208ENST00000551549 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
GCN1-208ENST00000551549 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 WTIPA6NIX2 430 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms