RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CSF1RP07333 972 aa16.43■□□□□ 0.22
RAB5C-206ENST00000550406 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
RAB5C-206ENST00000550406 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
RAB5C-206ENST00000550406 CTSWP56202 376 aa16.42■□□□□ 0.22
RAB5C-206ENST00000550406 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
RAB5C-206ENST00000550406 MASTLQ96GX5 879 aa16.42■□□□□ 0.22
RAB5C-206ENST00000550406 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
RAB5C-206ENST00000550406 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
RAB5C-206ENST00000550406 NPR1P16066 1061 aa16.41■□□□□ 0.22
RAB5C-206ENST00000550406 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
RAB5C-206ENST00000550406 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
RAB5C-206ENST00000550406 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
RAB5C-206ENST00000550406 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
RAB5C-206ENST00000550406 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
RAB5C-206ENST00000550406 GNAI3P08754 354 aa16.4■□□□□ 0.22
RAB5C-206ENST00000550406 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-206ENST00000550406 HSP90B1P14625 803 aaKnown RBP16.4■□□□□ 0.22
RAB5C-206ENST00000550406 RABL6Q3YEC7 729 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-206ENST00000550406 LMBR1LQ6UX01 489 aa16.4■□□□□ 0.22
RAB5C-206ENST00000550406 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB5C-206ENST00000550406 GREM2Q9H772 168 aa16.4■□□□□ 0.22
RAB5C-206ENST00000550406 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
RAB5C-206ENST00000550406 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
RAB5C-206ENST00000550406 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
RAB5C-206ENST00000550406 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
RAB5C-206ENST00000550406 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
RAB5C-206ENST00000550406 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
RAB5C-206ENST00000550406 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
RAB5C-206ENST00000550406 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
RAB5C-206ENST00000550406 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
RAB5C-206ENST00000550406 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
RAB5C-206ENST00000550406 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
RAB5C-206ENST00000550406 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
RAB5C-206ENST00000550406 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
RAB5C-206ENST00000550406 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
RAB5C-206ENST00000550406 GNAI2P04899 355 aa16.37■□□□□ 0.21
RAB5C-206ENST00000550406 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
RAB5C-206ENST00000550406 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
RAB5C-206ENST00000550406 SRCAPQ6ZRS2 3230 aa16.36■□□□□ 0.21
RAB5C-206ENST00000550406 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
RAB5C-206ENST00000550406 ITGA6P23229 1130 aa16.36■□□□□ 0.21
RAB5C-206ENST00000550406 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
RAB5C-206ENST00000550406 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
RAB5C-206ENST00000550406 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
RAB5C-206ENST00000550406 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
RAB5C-206ENST00000550406 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.217e-8■■■□□ 18.4
RAB5C-206ENST00000550406 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 GRAPQ13588 217 aa16.35■□□□□ 0.21
RAB5C-206ENST00000550406 DALRD3Q5D0E6 543 aaKnown RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
RAB5C-206ENST00000550406 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-206ENST00000550406 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
RAB5C-206ENST00000550406 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
RAB5C-206ENST00000550406 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
RAB5C-206ENST00000550406 MTX1Q13505 466 aa16.34■□□□□ 0.21
RAB5C-206ENST00000550406 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
RAB5C-206ENST00000550406 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
RAB5C-206ENST00000550406 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
RAB5C-206ENST00000550406 BBOX1O75936 387 aa16.33■□□□□ 0.2
RAB5C-206ENST00000550406 ATP8B2P98198 1209 aa16.33■□□□□ 0.2
RAB5C-206ENST00000550406 KLHDC4Q8TBB5 520 aa16.33■□□□□ 0.2
RAB5C-206ENST00000550406 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-206ENST00000550406 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
RAB5C-206ENST00000550406 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
RAB5C-206ENST00000550406 PNMA6EA0A0J9YXQ4 647 aa16.32■□□□□ 0.2
RAB5C-206ENST00000550406 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
RAB5C-206ENST00000550406 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-206ENST00000550406 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
RAB5C-206ENST00000550406 LTBP1Q14766 1721 aa16.32■□□□□ 0.2
RAB5C-206ENST00000550406 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
RAB5C-206ENST00000550406 SNED1Q8TER0 1413 aa16.32■□□□□ 0.2
RAB5C-206ENST00000550406 SBF1O95248 1867 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 C21orf2O43822 256 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
RAB5C-206ENST00000550406 POLA2Q14181 598 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 CEP85Q6P2H3 762 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
RAB5C-206ENST00000550406 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
RAB5C-206ENST00000550406 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
RAB5C-206ENST00000550406 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
RAB5C-206ENST00000550406 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
RAB5C-206ENST00000550406 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
RAB5C-206ENST00000550406 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
RAB5C-206ENST00000550406 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
RAB5C-206ENST00000550406 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-206ENST00000550406 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
RAB5C-206ENST00000550406 GPR162Q16538 588 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 MINPP1Q9UNW1 487 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 RIPOR2Q9Y4F9 1068 aa16.28■□□□□ 0.2
RAB5C-206ENST00000550406 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
RAB5C-206ENST00000550406 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms