RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 SF3B3Q15393 1217 aaKnown RBP21.66■■□□□ 1.06
BRF1-217ENST00000550375 DALRD3Q5D0E6 543 aaKnown RBP21.66■■□□□ 1.06
BRF1-217ENST00000550375 C20orf194Q5TEA3 1177 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 TTLL6Q8N841 843 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 MEIS3Q99687 375 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 PLA2G12BQ9BX93 195 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
BRF1-217ENST00000550375 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
BRF1-217ENST00000550375 UBTFL1P0CB47 393 aaPredicted RBP21.65■■□□□ 1.06
BRF1-217ENST00000550375 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
BRF1-217ENST00000550375 CNKSR1Q969H4 720 aa21.65■■□□□ 1.06
BRF1-217ENST00000550375 HOXA10P31260 410 aaPredicted RBP21.64■■□□□ 1.06
BRF1-217ENST00000550375 FOXO4P98177 505 aa21.64■■□□□ 1.06
BRF1-217ENST00000550375 CCDC152Q4G0S7 254 aa21.64■■□□□ 1.06
BRF1-217ENST00000550375 DDX46Q7L014 1031 aaKnown RBP21.64■■□□□ 1.06
BRF1-217ENST00000550375 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.06
BRF1-217ENST00000550375 ZNF219Q9P2Y4 722 aaPredicted RBP21.64■■□□□ 1.06
BRF1-217ENST00000550375 COG6Q9Y2V7 657 aa21.64■■□□□ 1.06
BRF1-217ENST00000550375 ALDH1B1P30837 517 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 GPR162Q16538 588 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 KAZALD1Q96I82 304 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 CRAMP1Q96RY5 1269 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 SEC31BQ9NQW1 1179 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 CHMP3Q9Y3E7 222 aa21.63■■□□□ 1.05
BRF1-217ENST00000550375 YBX3P16989 372 aaKnown RBP eCLIP21.62■■□□□ 1.05
BRF1-217ENST00000550375 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
BRF1-217ENST00000550375 PRPF40BQ6NWY9 871 aaKnown RBP21.62■■□□□ 1.05
BRF1-217ENST00000550375 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
BRF1-217ENST00000550375 GNAI3P08754 354 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 MVPQ14764 893 aaKnown RBP21.61■■□□□ 1.05
BRF1-217ENST00000550375 LMBR1LQ6UX01 489 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 BICC1Q9H694 974 aaKnown RBP21.61■■□□□ 1.05
BRF1-217ENST00000550375 GREM2Q9H772 168 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 SUPT16HQ9Y5B9 1047 aaKnown RBP21.61■■□□□ 1.05
BRF1-217ENST00000550375 COL4A1P02462 1669 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 SPEF2Q9C093 1822 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 CSF1RP07333 972 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
BRF1-217ENST00000550375 LRRFIP2Q9Y608 721 aaKnown RBP21.61■■□□□ 1.05
BRF1-217ENST00000550375 GRAPQ13588 217 aa21.6■■□□□ 1.05
BRF1-217ENST00000550375 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
BRF1-217ENST00000550375 GRAPLQ8TC17 118 aaPredicted RBP21.6■■□□□ 1.05
BRF1-217ENST00000550375 CELF1Q92879 486 aaKnown RBP21.6■■□□□ 1.05
BRF1-217ENST00000550375 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
BRF1-217ENST00000550375 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
BRF1-217ENST00000550375 C21orf2O43822 256 aa21.59■■□□□ 1.05
BRF1-217ENST00000550375 ITGA6P23229 1130 aa21.58■■□□□ 1.04
BRF1-217ENST00000550375 SLC51AQ86UW1 340 aa21.58■■□□□ 1.04
BRF1-217ENST00000550375 HDAC5Q9UQL6 1122 aa21.58■■□□□ 1.04
BRF1-217ENST00000550375 GNAI2P04899 355 aa21.57■■□□□ 1.04
BRF1-217ENST00000550375 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
BRF1-217ENST00000550375 C1orf115Q9H7X2 142 aa21.57■■□□□ 1.04
BRF1-217ENST00000550375 DDX19BQ9UMR2 479 aa21.57■■□□□ 1.04
BRF1-217ENST00000550375 RTL9Q8NET4 1388 aa21.56■■□□□ 1.04
BRF1-217ENST00000550375 ANKRD18BA2A2Z9 1011 aa21.56■■□□□ 1.04
BRF1-217ENST00000550375 BBOX1O75936 387 aa21.56■■□□□ 1.04
BRF1-217ENST00000550375 RPS8P62241 208 aaKnown RBP21.56■■□□□ 1.04
BRF1-217ENST00000550375 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
BRF1-217ENST00000550375 RABL6Q3YEC7 729 aaPredicted RBP21.56■■□□□ 1.04
BRF1-217ENST00000550375 CDC5LQ99459 802 aaKnown RBP21.56■■□□□ 1.04
BRF1-217ENST00000550375 UTRNP46939 3433 aa21.56■■□□□ 1.04
BRF1-217ENST00000550375 CCDC57Q2TAC2 916 aa21.55■■□□□ 1.04
BRF1-217ENST00000550375 ANKRD18AQ8IVF6 992 aa21.55■■□□□ 1.04
BRF1-217ENST00000550375 ARHGAP27Q6ZUM4 889 aa21.54■■□□□ 1.04
BRF1-217ENST00000550375 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
BRF1-217ENST00000550375 ZNF594Q96JF6 807 aaPredicted RBP21.54■■□□□ 1.04
BRF1-217ENST00000550375 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
BRF1-217ENST00000550375 GRIN3BO60391 1043 aa21.52■■□□□ 1.04
BRF1-217ENST00000550375 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
BRF1-217ENST00000550375 TAF7LQ5H9L4 462 aa21.52■■□□□ 1.04
BRF1-217ENST00000550375 CRBNQ96SW2 442 aa21.52■■□□□ 1.04
BRF1-217ENST00000550375 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
BRF1-217ENST00000550375 ATP6V0A2Q9Y487 856 aa21.52■■□□□ 1.04
BRF1-217ENST00000550375 CCDC93Q567U6 631 aa21.51■■□□□ 1.03
BRF1-217ENST00000550375 SP8Q8IXZ3 490 aa21.51■■□□□ 1.03
BRF1-217ENST00000550375 FER1L6Q2WGJ9 1857 aa21.51■■□□□ 1.03
BRF1-217ENST00000550375 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
BRF1-217ENST00000550375 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
BRF1-217ENST00000550375 TMC4Q7Z404 712 aa21.5■■□□□ 1.03
BRF1-217ENST00000550375 ZNF784Q8NCA9 323 aaPredicted RBP21.5■■□□□ 1.03
BRF1-217ENST00000550375 KLHDC4Q8TBB5 520 aa21.5■■□□□ 1.03
BRF1-217ENST00000550375 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
BRF1-217ENST00000550375 CHMP4BQ9H444 224 aaKnown RBP21.5■■□□□ 1.03
BRF1-217ENST00000550375 LRRC37AA6NMS7 1700 aa21.5■■□□□ 1.03
BRF1-217ENST00000550375 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
BRF1-217ENST00000550375 BSDC1Q9NW68 430 aaPredicted RBP21.49■■□□□ 1.03
BRF1-217ENST00000550375 SRGAP3O43295 1099 aa21.48■■□□□ 1.03
BRF1-217ENST00000550375 CCDC88AQ3V6T2 1871 aa21.48■■□□□ 1.03
BRF1-217ENST00000550375 RFX5P48382 616 aaPredicted RBP21.48■■□□□ 1.03
BRF1-217ENST00000550375 IRX6P78412 446 aaPredicted RBP21.48■■□□□ 1.03
BRF1-217ENST00000550375 RASSF7Q02833 373 aa21.48■■□□□ 1.03
BRF1-217ENST00000550375 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
BRF1-217ENST00000550375 RTKN2Q8IZC4 609 aa21.48■■□□□ 1.03
BRF1-217ENST00000550375 PNMA6EA0A0J9YXQ4 647 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 NFKBIEO00221 500 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 GPSM2P81274 684 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 MTX1Q13505 466 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 LDHAL6AQ6ZMR3 332 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 PUS3Q9BZE2 481 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms