RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 FSD1Q9BTV5 496 aa23.18■■□□□ 1.3
BRF1-215ENST00000549655 RREB1Q92766 1687 aa23.17■■□□□ 1.3
BRF1-215ENST00000549655 FOXD4L1Q9NU39 408 aa23.17■■□□□ 1.3
BRF1-215ENST00000549655 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
BRF1-215ENST00000549655 UBN2Q6ZU65 1347 aa23.16■■□□□ 1.3
BRF1-215ENST00000549655 NEK4P51957 841 aa23.16■■□□□ 1.3
BRF1-215ENST00000549655 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
BRF1-215ENST00000549655 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
BRF1-215ENST00000549655 IRS4O14654 1257 aaPredicted RBP23.16■■□□□ 1.3
BRF1-215ENST00000549655 TIMM10P62072 90 aa23.16■■□□□ 1.3
BRF1-215ENST00000549655 FBXO3Q9UK99 471 aa23.16■■□□□ 1.3
BRF1-215ENST00000549655 TAF7LQ5H9L4 462 aa23.15■■□□□ 1.3
BRF1-215ENST00000549655 TTLL11Q8NHH1 800 aa23.15■■□□□ 1.3
BRF1-215ENST00000549655 EDC3Q96F86 508 aaKnown RBP23.15■■□□□ 1.3
BRF1-215ENST00000549655 CTSWP56202 376 aa23.14■■□□□ 1.3
BRF1-215ENST00000549655 NMIQ13287 307 aaPredicted RBP23.14■■□□□ 1.3
BRF1-215ENST00000549655 FAM227BQ96M60 508 aa23.14■■□□□ 1.3
BRF1-215ENST00000549655 CEP126Q9P2H0 1117 aa23.14■■□□□ 1.3
BRF1-215ENST00000549655 CIZ1Q9ULV3 898 aaPredicted RBP23.14■■□□□ 1.3
BRF1-215ENST00000549655 ZNF609O15014 1411 aa23.14■■□□□ 1.29
BRF1-215ENST00000549655 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
BRF1-215ENST00000549655 HAUS7Q99871 368 aa23.14■■□□□ 1.29
BRF1-215ENST00000549655 CAMTA2O94983 1202 aa23.13■■□□□ 1.29
BRF1-215ENST00000549655 PTH1RQ03431 593 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
BRF1-215ENST00000549655 GREM2Q9H772 168 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 NDUFB9Q9Y6M9 179 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 MYH3P11055 1940 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 A0A1B0GUL7 405 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 PDE8AO60658 829 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 ITGA6P23229 1130 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 HSPA1LP34931 641 aa23.12■■□□□ 1.29
BRF1-215ENST00000549655 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
BRF1-215ENST00000549655 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
BRF1-215ENST00000549655 COL5A3P25940 1745 aaPredicted RBP23.11■■□□□ 1.29
BRF1-215ENST00000549655 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
BRF1-215ENST00000549655 A0A0D9SFI3 127 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 SUSD4Q5VX71 490 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 SNRKQ9NRH2 765 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 ANKRD18BA2A2Z9 1011 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 MCM2P49736 904 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 CCDC171Q6TFL3 1326 aa23.1■■□□□ 1.29
BRF1-215ENST00000549655 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
BRF1-215ENST00000549655 UPF3BQ9BZI7 483 aaKnown RBP23.09■■□□□ 1.29
BRF1-215ENST00000549655 AKAP2Q9Y2D5 859 aa23.09■■□□□ 1.29
BRF1-215ENST00000549655 RASEFQ8IZ41 740 aa23.09■■□□□ 1.29
BRF1-215ENST00000549655 GJD4Q96KN9 370 aaPredicted RBP23.09■■□□□ 1.29
BRF1-215ENST00000549655 KCNQ4P56696 695 aa23.08■■□□□ 1.29
BRF1-215ENST00000549655 LDHAL6AQ6ZMR3 332 aa23.08■■□□□ 1.29
BRF1-215ENST00000549655 UTP14AQ9BVJ6 771 aaKnown RBP23.08■■□□□ 1.29
BRF1-215ENST00000549655 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.28
BRF1-215ENST00000549655 RFX7Q2KHR2 1363 aa23.08■■□□□ 1.28
BRF1-215ENST00000549655 PARP10Q53GL7 1025 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 DDX46Q7L014 1031 aaKnown RBP23.07■■□□□ 1.28
BRF1-215ENST00000549655 AK7Q96M32 723 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 RIPOR2Q9Y4F9 1068 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 FAM177BA6PVY3 158 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 IL27Q8NEV9 243 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 AFF2P51816 1311 aa23.07■■□□□ 1.28
BRF1-215ENST00000549655 MED23Q9ULK4 1368 aa23.06■■□□□ 1.28
BRF1-215ENST00000549655 PRPF40BQ6NWY9 871 aaKnown RBP23.06■■□□□ 1.28
BRF1-215ENST00000549655 NIP7Q9Y221 180 aaKnown RBP eCLIP23.06■■□□□ 1.28
BRF1-215ENST00000549655 HCLS1P14317 486 aaPredicted RBP23.05■■□□□ 1.28
BRF1-215ENST00000549655 RAB3GAP1Q15042 981 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 METTL24Q5JXM2 366 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 KBTBD3Q8NAB2 608 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 MAP4K1Q92918 833 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 TMX3Q96JJ7 454 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 IFIT1P09914 478 aaKnown RBP23.05■■□□□ 1.28
BRF1-215ENST00000549655 NECTIN1Q15223 517 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 RIC1Q4ADV7 1423 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 KCNB2Q92953 911 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 XAGE2Q96GT9 111 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 CNNM1Q9NRU3 951 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 ZNF652Q9Y2D9 606 aa23.05■■□□□ 1.28
BRF1-215ENST00000549655 RBM8AQ9Y5S9 174 aaKnown RBP23.05■■□□□ 1.28
BRF1-215ENST00000549655 BTAF1O14981 1849 aa23.04■■□□□ 1.28
BRF1-215ENST00000549655 CNTNAP4Q9C0A0 1308 aa23.04■■□□□ 1.28
BRF1-215ENST00000549655 GOLIM4O00461 696 aa23.04■■□□□ 1.28
BRF1-215ENST00000549655 ADORA1P30542 326 aa23.04■■□□□ 1.28
BRF1-215ENST00000549655 ZNF589Q86UQ0 364 aaPredicted RBP23.04■■□□□ 1.28
BRF1-215ENST00000549655 MCM4P33991 863 aa23.03■■□□□ 1.28
BRF1-215ENST00000549655 KCNJ4P48050 445 aa23.03■■□□□ 1.28
BRF1-215ENST00000549655 CCDC158Q5M9N0 1113 aa23.03■■□□□ 1.28
BRF1-215ENST00000549655 GORABQ5T7V8 394 aa23.03■■□□□ 1.28
BRF1-215ENST00000549655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.03■■□□□ 1.28
BRF1-215ENST00000549655 CWC22Q9HCG8 908 aaKnown RBP23.03■■□□□ 1.28
BRF1-215ENST00000549655 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
BRF1-215ENST00000549655 NHSQ6T4R5 1651 aa23.03■■□□□ 1.28
BRF1-215ENST00000549655 NTSR2O95665 410 aa23.02■■□□□ 1.28
BRF1-215ENST00000549655 CLEC4GQ6UXB4 293 aa23.02■■□□□ 1.28
BRF1-215ENST00000549655 NOL8Q76FK4 1167 aaKnown RBP23.02■■□□□ 1.28
BRF1-215ENST00000549655 ZGPATQ8N5A5 531 aaKnown RBP23.02■■□□□ 1.28
BRF1-215ENST00000549655 CHGBP05060 677 aa23.01■■□□□ 1.27
BRF1-215ENST00000549655 ATP2B3Q16720 1220 aa23.01■■□□□ 1.27
BRF1-215ENST00000549655 TTC39AQ5SRH9 613 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 704.3 ms