RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
GCN1-204ENST00000548132 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
GCN1-204ENST00000548132 IL16Q14005 1332 aa16.13■□□□□ 0.17
GCN1-204ENST00000548132 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 EPHX2P34913 555 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 GRIPAP1Q4V328 841 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
GCN1-204ENST00000548132 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
GCN1-204ENST00000548132 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
GCN1-204ENST00000548132 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
GCN1-204ENST00000548132 KIAA2012Q0VF49 1180 aa16.11■□□□□ 0.17
GCN1-204ENST00000548132 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
GCN1-204ENST00000548132 G2E3Q7L622 706 aa16.11■□□□□ 0.17
GCN1-204ENST00000548132 MYD88Q99836 296 aa16.11■□□□□ 0.17
GCN1-204ENST00000548132 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
GCN1-204ENST00000548132 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
GCN1-204ENST00000548132 IGKV5-2P06315 115 aa16.1■□□□□ 0.17
GCN1-204ENST00000548132 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
GCN1-204ENST00000548132 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
GCN1-204ENST00000548132 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
GCN1-204ENST00000548132 BBOX1O75936 387 aa16.09■□□□□ 0.17
GCN1-204ENST00000548132 DPP8Q6V1X1 898 aaPredicted RBP16.09■□□□□ 0.17
GCN1-204ENST00000548132 NIM1KQ8IY84 436 aa16.09■□□□□ 0.17
GCN1-204ENST00000548132 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
GCN1-204ENST00000548132 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
GCN1-204ENST00000548132 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
GCN1-204ENST00000548132 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
GCN1-204ENST00000548132 EPS15P42566 896 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 CXCL9Q07325 125 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 TWISTNBQ3B726 338 aaPredicted RBP16.08■□□□□ 0.16
GCN1-204ENST00000548132 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
GCN1-204ENST00000548132 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 RIC3Q7Z5B4 369 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 JARID2Q92833 1246 aaPredicted RBP16.08■□□□□ 0.16
GCN1-204ENST00000548132 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 GJA3Q9Y6H8 435 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
GCN1-204ENST00000548132 EIF6P56537 245 aaKnown RBP16.07■□□□□ 0.16
GCN1-204ENST00000548132 MAP1SQ66K74 1059 aaPredicted RBP16.07■□□□□ 0.16
GCN1-204ENST00000548132 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
GCN1-204ENST00000548132 MPNDQ8N594 471 aa16.07■□□□□ 0.16
GCN1-204ENST00000548132 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
GCN1-204ENST00000548132 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
GCN1-204ENST00000548132 ZNF609O15014 1411 aa16.07■□□□□ 0.16
GCN1-204ENST00000548132 POLR2AP24928 1970 aaKnown RBP16.06■□□□□ 0.16
GCN1-204ENST00000548132 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 ANP32CO43423 234 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 GPSM2P81274 684 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 FMR1Q06787 632 aaKnown RBP eCLIP16.06■□□□□ 0.165e-7■■■■□ 19.7
GCN1-204ENST00000548132 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 CWC25Q9NXE8 425 aaPredicted RBP16.06■□□□□ 0.16
GCN1-204ENST00000548132 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
GCN1-204ENST00000548132 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
GCN1-204ENST00000548132 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
GCN1-204ENST00000548132 GMPSP49915 693 aaPredicted RBP16.04■□□□□ 0.16
GCN1-204ENST00000548132 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
GCN1-204ENST00000548132 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
GCN1-204ENST00000548132 RAD17O75943 681 aa16.03■□□□□ 0.16
GCN1-204ENST00000548132 CASP7P55210 303 aa16.03■□□□□ 0.16
GCN1-204ENST00000548132 FLIIQ13045 1269 aa16.03■□□□□ 0.16
GCN1-204ENST00000548132 TRPM4Q8TD43 1214 aa16.03■□□□□ 0.16
GCN1-204ENST00000548132 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
GCN1-204ENST00000548132 PDE8AO60658 829 aa16.02■□□□□ 0.16
GCN1-204ENST00000548132 CTSWP56202 376 aa16.02■□□□□ 0.16
GCN1-204ENST00000548132 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
GCN1-204ENST00000548132 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.16
GCN1-204ENST00000548132 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
GCN1-204ENST00000548132 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
GCN1-204ENST00000548132 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 VAMP4O75379 141 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 CNTROBQ8N137 903 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
GCN1-204ENST00000548132 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
GCN1-204ENST00000548132 TRAF5O00463 557 aa16■□□□□ 0.15
GCN1-204ENST00000548132 EGFRP00533 1210 aa16■□□□□ 0.15
GCN1-204ENST00000548132 IFFO2Q5TF58 517 aa16■□□□□ 0.15
GCN1-204ENST00000548132 USP50Q70EL3 339 aaPredicted RBP16■□□□□ 0.15
GCN1-204ENST00000548132 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
GCN1-204ENST00000548132 ADARB2Q9NS39 739 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms