RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 UBE3BQ7Z3V4 1068 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 RPGRQ92834 1020 aaKnown RBP21.9■■□□□ 1.1
HDAC7-227ENST00000548080 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 AAMPQ13685 434 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 PRPF40BQ6NWY9 871 aaKnown RBP21.9■■□□□ 1.1
HDAC7-227ENST00000548080 TMEM57Q8N5G2 664 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 OLFM4Q6UX06 510 aa21.89■■□□□ 1.09
HDAC7-227ENST00000548080 CCDC85AQ96PX6 553 aaPredicted RBP21.89■■□□□ 1.09
HDAC7-227ENST00000548080 ABCC4O15439 1325 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 C21orf2O43822 256 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 CNKSR1Q969H4 720 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 SRCIN1Q9C0H9 1055 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 COL4A1P02462 1669 aa21.88■■□□□ 1.09
HDAC7-227ENST00000548080 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
HDAC7-227ENST00000548080 ARHGAP27Q6ZUM4 889 aa21.87■■□□□ 1.09
HDAC7-227ENST00000548080 DDX19BQ9UMR2 479 aa21.87■■□□□ 1.09
HDAC7-227ENST00000548080 H7C1W4 665 aa21.86■■□□□ 1.09
HDAC7-227ENST00000548080 RBM17Q96I25 401 aaKnown RBP21.86■■□□□ 1.09
HDAC7-227ENST00000548080 CASP7P55210 303 aa21.84■■□□□ 1.09
HDAC7-227ENST00000548080 CDHR2Q9BYE9 1310 aa21.84■■□□□ 1.09
HDAC7-227ENST00000548080 MYH3P11055 1940 aa21.84■■□□□ 1.09
HDAC7-227ENST00000548080 PDE8AO60658 829 aa21.83■■□□□ 1.09
HDAC7-227ENST00000548080 HOXA10P31260 410 aaPredicted RBP21.83■■□□□ 1.09
HDAC7-227ENST00000548080 RASSF7Q02833 373 aa21.83■■□□□ 1.09
HDAC7-227ENST00000548080 ALDH1L1O75891 902 aa21.83■■□□□ 1.08
HDAC7-227ENST00000548080 ALDH1B1P30837 517 aa21.83■■□□□ 1.08
HDAC7-227ENST00000548080 INTS3Q68E01 1043 aaKnown RBP21.83■■□□□ 1.08
HDAC7-227ENST00000548080 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.08
HDAC7-227ENST00000548080 CHMP4BQ9H444 224 aaKnown RBP21.83■■□□□ 1.08
HDAC7-227ENST00000548080 C9orf78Q9NZ63 289 aaPredicted RBP21.83■■□□□ 1.08
HDAC7-227ENST00000548080 CHD4Q14839 1912 aa21.82■■□□□ 1.08
HDAC7-227ENST00000548080 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
HDAC7-227ENST00000548080 SEC31BQ9NQW1 1179 aa21.82■■□□□ 1.08
HDAC7-227ENST00000548080 GRM8O00222 908 aa21.81■■□□□ 1.08
HDAC7-227ENST00000548080 CTSWP56202 376 aa21.81■■□□□ 1.08
HDAC7-227ENST00000548080 SF3B3Q15393 1217 aaKnown RBP21.81■■□□□ 1.08
HDAC7-227ENST00000548080 PPEF1O14829 653 aaPredicted RBP21.8■■□□□ 1.08
HDAC7-227ENST00000548080 NBPF7P0C2Y1 421 aaPredicted RBP21.8■■□□□ 1.08
HDAC7-227ENST00000548080 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
HDAC7-227ENST00000548080 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
HDAC7-227ENST00000548080 EPHA10Q5JZY3 1008 aa21.79■■□□□ 1.08
HDAC7-227ENST00000548080 FER1L6Q2WGJ9 1857 aa21.79■■□□□ 1.08
HDAC7-227ENST00000548080 SPEF2Q9C093 1822 aa21.79■■□□□ 1.08
HDAC7-227ENST00000548080 NFKBIEO00221 500 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
HDAC7-227ENST00000548080 GRAPQ13588 217 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 CCDC152Q4G0S7 254 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
HDAC7-227ENST00000548080 SUCLG2Q96I99 432 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 CCDC88AQ3V6T2 1871 aa21.78■■□□□ 1.08
HDAC7-227ENST00000548080 ZBTB7BO15156 539 aaPredicted RBP21.77■■□□□ 1.08
HDAC7-227ENST00000548080 HSP90B1P14625 803 aaKnown RBP21.77■■□□□ 1.08
HDAC7-227ENST00000548080 PRELPP51888 382 aa21.77■■□□□ 1.08
HDAC7-227ENST00000548080 GREM2Q9H772 168 aa21.77■■□□□ 1.08
HDAC7-227ENST00000548080 ZBTB40Q9NUA8 1239 aa21.77■■□□□ 1.08
HDAC7-227ENST00000548080 SBF1O95248 1867 aa21.77■■□□□ 1.07
HDAC7-227ENST00000548080 FOXO4P98177 505 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 PLA2G12BQ9BX93 195 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
HDAC7-227ENST00000548080 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
HDAC7-227ENST00000548080 KAZALD1Q96I82 304 aa21.74■■□□□ 1.07
HDAC7-227ENST00000548080 PCDHB15Q9Y5E8 787 aa21.74■■□□□ 1.07
HDAC7-227ENST00000548080 YY1P25490 414 aa21.73■■□□□ 1.07
HDAC7-227ENST00000548080 C9orf131Q5VYM1 1079 aa21.73■■□□□ 1.07
HDAC7-227ENST00000548080 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
HDAC7-227ENST00000548080 UTYO14607 1347 aa21.73■■□□□ 1.07
HDAC7-227ENST00000548080 BBOX1O75936 387 aa21.72■■□□□ 1.07
HDAC7-227ENST00000548080 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
HDAC7-227ENST00000548080 MEIS3Q99687 375 aa21.72■■□□□ 1.07
HDAC7-227ENST00000548080 RNF181Q9P0P0 153 aa21.72■■□□□ 1.07
HDAC7-227ENST00000548080 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
HDAC7-227ENST00000548080 CSF1RP07333 972 aa21.71■■□□□ 1.07
HDAC7-227ENST00000548080 ITGA6P23229 1130 aa21.71■■□□□ 1.07
HDAC7-227ENST00000548080 RPS8P62241 208 aaKnown RBP21.71■■□□□ 1.07
HDAC7-227ENST00000548080 TAOK3Q9H2K8 898 aa21.71■■□□□ 1.07
HDAC7-227ENST00000548080 BICC1Q9H694 974 aaKnown RBP21.71■■□□□ 1.07
HDAC7-227ENST00000548080 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
HDAC7-227ENST00000548080 LRRC37AA6NMS7 1700 aa21.71■■□□□ 1.07
HDAC7-227ENST00000548080 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
HDAC7-227ENST00000548080 KDM2BQ8NHM5 1336 aa21.7■■□□□ 1.06
HDAC7-227ENST00000548080 FKBP4Q02790 459 aaKnown RBP eCLIP21.7■■□□□ 1.06
HDAC7-227ENST00000548080 ANKRD18AQ8IVF6 992 aa21.7■■□□□ 1.06
HDAC7-227ENST00000548080 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
HDAC7-227ENST00000548080 ANKRD44Q8N8A2 993 aa21.7■■□□□ 1.06
HDAC7-227ENST00000548080 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-227ENST00000548080 RTKN2Q8IZC4 609 aa21.69■■□□□ 1.06
HDAC7-227ENST00000548080 ZNF594Q96JF6 807 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-227ENST00000548080 RWDD1Q9H446 243 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-227ENST00000548080 TIAM2Q8IVF5 1701 aa21.68■■□□□ 1.06
HDAC7-227ENST00000548080 RTL9Q8NET4 1388 aa21.68■■□□□ 1.06
HDAC7-227ENST00000548080 IGHDP01880 384 aa21.68■■□□□ 1.06
HDAC7-227ENST00000548080 LMNB1P20700 586 aa21.68■■□□□ 1.06
HDAC7-227ENST00000548080 CDC5LQ99459 802 aaKnown RBP21.68■■□□□ 1.06
HDAC7-227ENST00000548080 GPSM2P81274 684 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms