RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 L3MBTL3Q96JM7 780 aaPredicted RBP19.64■□□□□ 0.73
SSH1-204ENST00000546697 LTBP1Q14766 1721 aa19.63■□□□□ 0.73
SSH1-204ENST00000546697 COL4A5P29400 1685 aa19.63■□□□□ 0.73
SSH1-204ENST00000546697 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
SSH1-204ENST00000546697 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
SSH1-204ENST00000546697 DPY19L2Q6NUT2 758 aa19.63■□□□□ 0.73
SSH1-204ENST00000546697 RBM46Q8TBY0 533 aaKnown RBP19.63■□□□□ 0.73
SSH1-204ENST00000546697 DUOX1Q9NRD9 1551 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 RTL9Q8NET4 1388 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 PDE8AO60658 829 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 VEGFAP15692 232 aaPredicted RBP19.62■□□□□ 0.73
SSH1-204ENST00000546697 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 ZNF277Q9NRM2 450 aaPredicted RBP19.62■□□□□ 0.73
SSH1-204ENST00000546697 COL4A1P02462 1669 aa19.62■□□□□ 0.73
SSH1-204ENST00000546697 H7C1W4 665 aa19.61■□□□□ 0.73
SSH1-204ENST00000546697 DNAAF4Q8WXU2 420 aa19.61■□□□□ 0.73
SSH1-204ENST00000546697 PLA2G12BQ9BX93 195 aa19.61■□□□□ 0.73
SSH1-204ENST00000546697 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
SSH1-204ENST00000546697 CASP7P55210 303 aa19.6■□□□□ 0.73
SSH1-204ENST00000546697 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
SSH1-204ENST00000546697 TAF1P21675 1872 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 FSTL1Q12841 308 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 GCKRQ14397 625 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 SUPT20HQ8NEM7 779 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
SSH1-204ENST00000546697 RRAGCQ9HB90 399 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 SCN4AP35499 1836 aa19.59■□□□□ 0.73
SSH1-204ENST00000546697 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.72
SSH1-204ENST00000546697 CWF19L2Q2TBE0 894 aaKnown RBP19.58■□□□□ 0.72
SSH1-204ENST00000546697 MYH3P11055 1940 aa19.57■□□□□ 0.72
SSH1-204ENST00000546697 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
SSH1-204ENST00000546697 RPS8P62241 208 aaKnown RBP19.57■□□□□ 0.72
SSH1-204ENST00000546697 CCDC152Q4G0S7 254 aa19.57■□□□□ 0.72
SSH1-204ENST00000546697 BEND3Q5T5X7 828 aa19.57■□□□□ 0.72
SSH1-204ENST00000546697 TMX4Q9H1E5 349 aaPredicted RBP19.57■□□□□ 0.72
SSH1-204ENST00000546697 PODXL2Q9NZ53 605 aa19.57■□□□□ 0.72
SSH1-204ENST00000546697 HSPA6P17066 643 aa19.56■□□□□ 0.72
SSH1-204ENST00000546697 KIAA2012Q0VF49 1180 aa19.56■□□□□ 0.72
SSH1-204ENST00000546697 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
SSH1-204ENST00000546697 GPC2Q8N158 579 aa19.56■□□□□ 0.72
SSH1-204ENST00000546697 MPNDQ8N594 471 aa19.56■□□□□ 0.72
SSH1-204ENST00000546697 TTLL11Q8NHH1 800 aa19.56■□□□□ 0.72
SSH1-204ENST00000546697 ZNF541Q9H0D2 1346 aa19.55■□□□□ 0.72
SSH1-204ENST00000546697 DDNO94850 711 aaPredicted RBP19.55■□□□□ 0.72
SSH1-204ENST00000546697 CTSWP56202 376 aa19.55■□□□□ 0.72
SSH1-204ENST00000546697 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
SSH1-204ENST00000546697 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
SSH1-204ENST00000546697 JDP2Q8WYK2 163 aa19.55■□□□□ 0.72
SSH1-204ENST00000546697 CSF1RP07333 972 aa19.54■□□□□ 0.72
SSH1-204ENST00000546697 BRPF1P55201 1214 aaPredicted RBP19.54■□□□□ 0.72
SSH1-204ENST00000546697 ALDH1L2Q3SY69 923 aa19.54■□□□□ 0.72
SSH1-204ENST00000546697 MRPL50Q8N5N7 158 aaKnown RBP19.54■□□□□ 0.72
SSH1-204ENST00000546697 ADAMTSL1Q8N6G6 1762 aa19.54■□□□□ 0.72
SSH1-204ENST00000546697 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
SSH1-204ENST00000546697 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
SSH1-204ENST00000546697 SEC31BQ9NQW1 1179 aa19.53■□□□□ 0.72
SSH1-204ENST00000546697 PTPRCP08575 1304 aa19.52■□□□□ 0.72
SSH1-204ENST00000546697 ALDH1L1O75891 902 aa19.52■□□□□ 0.72
SSH1-204ENST00000546697 MIER1Q8N108 512 aa19.52■□□□□ 0.72
SSH1-204ENST00000546697 LARGE2Q8N3Y3 721 aa19.52■□□□□ 0.72
SSH1-204ENST00000546697 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
SSH1-204ENST00000546697 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
SSH1-204ENST00000546697 UBE3BQ7Z3V4 1068 aa19.51■□□□□ 0.71
SSH1-204ENST00000546697 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
SSH1-204ENST00000546697 ZNRF3Q9ULT6 936 aa19.51■□□□□ 0.71
SSH1-204ENST00000546697 UTYO14607 1347 aa19.51■□□□□ 0.71
SSH1-204ENST00000546697 F6X3S4 739 aa19.5■□□□□ 0.71
SSH1-204ENST00000546697 AOC3Q16853 763 aa19.5■□□□□ 0.71
SSH1-204ENST00000546697 NIM1KQ8IY84 436 aa19.5■□□□□ 0.71
SSH1-204ENST00000546697 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
SSH1-204ENST00000546697 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
SSH1-204ENST00000546697 TAF1DQ9H5J8 278 aaPredicted RBP19.5■□□□□ 0.71
SSH1-204ENST00000546697 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
SSH1-204ENST00000546697 EIF6P56537 245 aaKnown RBP19.49■□□□□ 0.71
SSH1-204ENST00000546697 GPSM2P81274 684 aa19.49■□□□□ 0.71
SSH1-204ENST00000546697 JARID2Q92833 1246 aaPredicted RBP19.49■□□□□ 0.71
SSH1-204ENST00000546697 POLLQ9UGP5 575 aa19.49■□□□□ 0.71
SSH1-204ENST00000546697 APLP1P51693 650 aa19.48■□□□□ 0.71
SSH1-204ENST00000546697 ANKRD18AQ8IVF6 992 aa19.48■□□□□ 0.71
SSH1-204ENST00000546697 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
SSH1-204ENST00000546697 GREM2Q9H772 168 aa19.48■□□□□ 0.71
SSH1-204ENST00000546697 ZNF609O15014 1411 aa19.48■□□□□ 0.71
SSH1-204ENST00000546697 GRM8O00222 908 aa19.47■□□□□ 0.71
SSH1-204ENST00000546697 SCNN1DP51172 638 aa19.47■□□□□ 0.71
SSH1-204ENST00000546697 FOXO4P98177 505 aa19.47■□□□□ 0.71
SSH1-204ENST00000546697 CXCL9Q07325 125 aa19.47■□□□□ 0.71
SSH1-204ENST00000546697 HACL1Q9UJ83 578 aa19.47■□□□□ 0.71
SSH1-204ENST00000546697 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
SSH1-204ENST00000546697 WASHC4Q2M389 1173 aa19.46■□□□□ 0.71
SSH1-204ENST00000546697 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
SSH1-204ENST00000546697 EYA3Q99504 573 aa19.46■□□□□ 0.71
SSH1-204ENST00000546697 SRCIN1Q9C0H9 1055 aa19.46■□□□□ 0.71
SSH1-204ENST00000546697 XDHP47989 1333 aa19.46■□□□□ 0.71
SSH1-204ENST00000546697 YDJCA8MPS7 323 aa19.45■□□□□ 0.7
SSH1-204ENST00000546697 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
SSH1-204ENST00000546697 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
SSH1-204ENST00000546697 MINPP1Q9UNW1 487 aa19.44■□□□□ 0.7
SSH1-204ENST00000546697 ITGA6P23229 1130 aa19.43■□□□□ 0.7
SSH1-204ENST00000546697 EPHX2P34913 555 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms