RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
LIMS2-217ENST00000545738 SRGNP10124 158 aa20.51■□□□□ 0.87
LIMS2-217ENST00000545738 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
LIMS2-217ENST00000545738 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
LIMS2-217ENST00000545738 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
LIMS2-217ENST00000545738 MS4A1P11836 297 aa20.5■□□□□ 0.87
LIMS2-217ENST00000545738 CTSWP56202 376 aa20.5■□□□□ 0.87
LIMS2-217ENST00000545738 TTLL11Q8NHH1 800 aa20.5■□□□□ 0.87
LIMS2-217ENST00000545738 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-217ENST00000545738 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
LIMS2-217ENST00000545738 NLRP3Q96P20 1036 aa20.5■□□□□ 0.87
LIMS2-217ENST00000545738 PDE6BP35913 854 aa20.49■□□□□ 0.87
LIMS2-217ENST00000545738 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
LIMS2-217ENST00000545738 GREM2Q9H772 168 aa20.49■□□□□ 0.87
LIMS2-217ENST00000545738 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
LIMS2-217ENST00000545738 CSF1RP07333 972 aa20.48■□□□□ 0.87
LIMS2-217ENST00000545738 FAM161AQ3B820 660 aa20.48■□□□□ 0.87
LIMS2-217ENST00000545738 RABL6Q3YEC7 729 aaPredicted RBP20.48■□□□□ 0.87
LIMS2-217ENST00000545738 ZBTB40Q9NUA8 1239 aa20.48■□□□□ 0.87
LIMS2-217ENST00000545738 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
LIMS2-217ENST00000545738 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
LIMS2-217ENST00000545738 TGFB2P61812 414 aa20.47■□□□□ 0.87
LIMS2-217ENST00000545738 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
LIMS2-217ENST00000545738 GNAI3P08754 354 aa20.46■□□□□ 0.87
LIMS2-217ENST00000545738 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
LIMS2-217ENST00000545738 H0YIN7 160 aa20.45■□□□□ 0.86
LIMS2-217ENST00000545738 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
LIMS2-217ENST00000545738 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
LIMS2-217ENST00000545738 CELF1Q92879 486 aaKnown RBP20.45■□□□□ 0.86
LIMS2-217ENST00000545738 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
LIMS2-217ENST00000545738 GNAI2P04899 355 aa20.44■□□□□ 0.86
LIMS2-217ENST00000545738 ZNF622Q969S3 477 aaKnown RBP eCLIP20.44■□□□□ 0.86
LIMS2-217ENST00000545738 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 PNMA6EA0A0J9YXQ4 647 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 NPR1P16066 1061 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 CCDC152Q4G0S7 254 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
LIMS2-217ENST00000545738 ITGA6P23229 1130 aa20.42■□□□□ 0.86
LIMS2-217ENST00000545738 RPGRQ92834 1020 aaKnown RBP20.42■□□□□ 0.86
LIMS2-217ENST00000545738 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-217ENST00000545738 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
LIMS2-217ENST00000545738 SIRT2Q8IXJ6 389 aa20.41■□□□□ 0.86
LIMS2-217ENST00000545738 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-217ENST00000545738 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
LIMS2-217ENST00000545738 CEP85Q6P2H3 762 aa20.41■□□□□ 0.86
LIMS2-217ENST00000545738 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
LIMS2-217ENST00000545738 MTX1Q13505 466 aa20.4■□□□□ 0.86
LIMS2-217ENST00000545738 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
LIMS2-217ENST00000545738 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
LIMS2-217ENST00000545738 GRAPQ13588 217 aa20.39■□□□□ 0.86
LIMS2-217ENST00000545738 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.86
LIMS2-217ENST00000545738 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.86
LIMS2-217ENST00000545738 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.86
LIMS2-217ENST00000545738 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.86
LIMS2-217ENST00000545738 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.85
LIMS2-217ENST00000545738 C7orf43Q8WVR3 580 aa20.39■□□□□ 0.85
LIMS2-217ENST00000545738 PIM2Q9P1W9 311 aa20.39■□□□□ 0.85
LIMS2-217ENST00000545738 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
LIMS2-217ENST00000545738 SNED1Q8TER0 1413 aa20.38■□□□□ 0.85
LIMS2-217ENST00000545738 ARFGEF1Q9Y6D6 1849 aa20.38■□□□□ 0.85
LIMS2-217ENST00000545738 YBX3P16989 372 aaKnown RBP eCLIP20.38■□□□□ 0.85
LIMS2-217ENST00000545738 TTLL6Q8N841 843 aa20.38■□□□□ 0.85
LIMS2-217ENST00000545738 A0A1B0GUL6 1792 aa20.37■□□□□ 0.85
LIMS2-217ENST00000545738 SRGAP3O43295 1099 aa20.37■□□□□ 0.85
LIMS2-217ENST00000545738 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
LIMS2-217ENST00000545738 ZNF219Q9P2Y4 722 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-217ENST00000545738 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
LIMS2-217ENST00000545738 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 IFIT5Q13325 482 aaKnown RBP20.36■□□□□ 0.85
LIMS2-217ENST00000545738 CNKSR1Q969H4 720 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
LIMS2-217ENST00000545738 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
LIMS2-217ENST00000545738 POLA2Q14181 598 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 LTBP1Q14766 1721 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 BCS1LQ9Y276 419 aa20.36■□□□□ 0.85
LIMS2-217ENST00000545738 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
LIMS2-217ENST00000545738 ALDH1B1P30837 517 aa20.35■□□□□ 0.85
LIMS2-217ENST00000545738 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
LIMS2-217ENST00000545738 DALRD3Q5D0E6 543 aaKnown RBP20.35■□□□□ 0.85
LIMS2-217ENST00000545738 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
LIMS2-217ENST00000545738 WTIPA6NIX2 430 aaPredicted RBP20.34■□□□□ 0.85
LIMS2-217ENST00000545738 C21orf2O43822 256 aa20.34■□□□□ 0.85
LIMS2-217ENST00000545738 LRRC24Q50LG9 513 aa20.34■□□□□ 0.85
LIMS2-217ENST00000545738 DUOX1Q9NRD9 1551 aa20.34■□□□□ 0.85
LIMS2-217ENST00000545738 ANKRD18AQ8IVF6 992 aa20.33■□□□□ 0.85
LIMS2-217ENST00000545738 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.85
LIMS2-217ENST00000545738 HDAC5Q9UQL6 1122 aa20.33■□□□□ 0.84
LIMS2-217ENST00000545738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.33■□□□□ 0.84
LIMS2-217ENST00000545738 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
LIMS2-217ENST00000545738 BBOX1O75936 387 aa20.32■□□□□ 0.84
LIMS2-217ENST00000545738 SIL1Q9H173 461 aa20.32■□□□□ 0.84
LIMS2-217ENST00000545738 BSDC1Q9NW68 430 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-217ENST00000545738 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
LIMS2-217ENST00000545738 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
LIMS2-217ENST00000545738 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
LIMS2-217ENST00000545738 RPAP2Q8IXW5 612 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-217ENST00000545738 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
LIMS2-217ENST00000545738 MINPP1Q9UNW1 487 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms