RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 ARMC3Q5W041 872 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 RBM12BQ8IXT5 1001 aaKnown RBP14.74□□□□□ -0.05
AP3B2-210ENST00000543938 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 A0A1B0GUA9 196 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 PPFIA4O75335 1185 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 ECM2O94769 699 aaPredicted RBP14.74□□□□□ -0.05
AP3B2-210ENST00000543938 OATP04181 439 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 CCDC93Q567U6 631 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 LMCD1Q9NZU5 365 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.74□□□□□ -0.05
AP3B2-210ENST00000543938 NUP155O75694 1391 aa14.74□□□□□ -0.05
AP3B2-210ENST00000543938 TPD52L2O43399 206 aaKnown RBP14.73□□□□□ -0.05
AP3B2-210ENST00000543938 RLBP1P12271 317 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 RDXP35241 583 aaKnown RBP14.73□□□□□ -0.05
AP3B2-210ENST00000543938 HHATQ5VTY9 493 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 FUCA2Q9BTY2 467 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 MX1P20591 662 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 GCKP35557 465 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 PARD3BQ8TEW8 1205 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
AP3B2-210ENST00000543938 IRX2Q9BZI1 471 aaPredicted RBP14.73□□□□□ -0.05
AP3B2-210ENST00000543938 CHUKO15111 745 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 PAX3P23760 479 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 RAB27AP51159 221 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 SNX1Q13596 522 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 FBXW10Q5XX13 1052 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 ZKSCAN4Q969J2 545 aaPredicted RBP14.72□□□□□ -0.05
AP3B2-210ENST00000543938 KIF9Q9HAQ2 790 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 SEC31AO94979 1220 aaKnown RBP14.72□□□□□ -0.05
AP3B2-210ENST00000543938 WLSQ5T9L3 541 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 THUMPD2Q9BTF0 503 aaKnown RBP14.72□□□□□ -0.05
AP3B2-210ENST00000543938 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
AP3B2-210ENST00000543938 CEP170BQ9Y4F5 1589 aaPredicted RBP14.72□□□□□ -0.05
AP3B2-210ENST00000543938 C3orf20Q8ND61 904 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 UTP14AQ9BVJ6 771 aaKnown RBP14.71□□□□□ -0.05
AP3B2-210ENST00000543938 RASA3Q14644 834 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 CC2D1AQ6P1N0 951 aaPredicted RBP14.71□□□□□ -0.05
AP3B2-210ENST00000543938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.71□□□□□ -0.05
AP3B2-210ENST00000543938 CABS1Q96KC9 395 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 KCND1Q9NSA2 647 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 SUN2Q9UH99 717 aa14.71□□□□□ -0.05
AP3B2-210ENST00000543938 NOS1P29475 1434 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 MFSD4BQ5TF39 518 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 MYLK4Q86YV6 388 aaPredicted RBP14.7□□□□□ -0.06
AP3B2-210ENST00000543938 ZGPATQ8N5A5 531 aaKnown RBP14.7□□□□□ -0.06
AP3B2-210ENST00000543938 UBXN4Q92575 508 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 PLEKHG4BQ96PX9 1271 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
AP3B2-210ENST00000543938 PYGLP06737 847 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 ALDH1B1P30837 517 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
AP3B2-210ENST00000543938 RBM47A0AV96 593 aaKnown RBP14.69□□□□□ -0.06
AP3B2-210ENST00000543938 H3BQF6 201 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 MCM6Q14566 821 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.69□□□□□ -0.06
AP3B2-210ENST00000543938 ANKRD30BQ9BXX2 1392 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 USP27XA6NNY8 438 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 LIG3P49916 1009 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 IQCA1Q86XH1 822 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
AP3B2-210ENST00000543938 ZSCAN9O15535 394 aaPredicted RBP14.69□□□□□ -0.06
AP3B2-210ENST00000543938 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
AP3B2-210ENST00000543938 BRD1O95696 1058 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 BMP2KLQ5H9B9 411 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 LRRN4CLQ8ND94 238 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 TCP11Q8WWU5 503 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 HOMER3Q9NSC5 361 aa14.69□□□□□ -0.06
AP3B2-210ENST00000543938 NEMFO60524 1076 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 NAP1L1P55209 391 aaKnown RBP14.68□□□□□ -0.06
AP3B2-210ENST00000543938 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 PER1O15534 1290 aaPredicted RBP14.68□□□□□ -0.06
AP3B2-210ENST00000543938 HSPA2P54652 639 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 CCDC178Q5BJE1 867 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 CDCA2Q69YH5 1023 aaPredicted RBP14.68□□□□□ -0.06
AP3B2-210ENST00000543938 DZIP3Q86Y13 1208 aaKnown RBP14.68□□□□□ -0.06
AP3B2-210ENST00000543938 ZBTB10Q96DT7 871 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 USP26Q9BXU7 913 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 NRBP1Q9UHY1 535 aa14.68□□□□□ -0.06
AP3B2-210ENST00000543938 EXOC5O00471 708 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 ERC2O15083 957 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 FAM163AQ96GL9 167 aaPredicted RBP14.67□□□□□ -0.06
AP3B2-210ENST00000543938 VPS18Q9P253 973 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 RTN3O95197 1032 aaPredicted RBP14.67□□□□□ -0.06
AP3B2-210ENST00000543938 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
AP3B2-210ENST00000543938 BICD2Q8TD16 824 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 TBC1D5Q92609 795 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 MRFAP1L1Q96HT8 127 aa14.67□□□□□ -0.06
AP3B2-210ENST00000543938 SYNMO15061 1565 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 CLNS1AP54105 237 aaKnown RBP14.66□□□□□ -0.06
AP3B2-210ENST00000543938 DRC7Q8IY82 874 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 SAAL1Q96ER3 474 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 ARFGAP3Q9NP61 516 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 ISM2Q6H9L7 571 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 KIAA1328Q86T90 577 aa14.66□□□□□ -0.06
AP3B2-210ENST00000543938 AKAP2Q9Y2D5 859 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms