RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 IFFO2Q5TF58 517 aa14.68□□□□□ -0.06
VTN-203ENST00000542029 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
VTN-203ENST00000542029 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
VTN-203ENST00000542029 CCDC191Q8NCU4 936 aa14.68□□□□□ -0.06
VTN-203ENST00000542029 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
VTN-203ENST00000542029 DICER1Q9UPY3 1922 aaKnown RBP14.68□□□□□ -0.06
VTN-203ENST00000542029 IL16Q14005 1332 aa14.67□□□□□ -0.06
VTN-203ENST00000542029 PASKQ96RG2 1323 aa14.67□□□□□ -0.06
VTN-203ENST00000542029 STK31Q9BXU1 1019 aa14.67□□□□□ -0.06
VTN-203ENST00000542029 PHAXQ9H814 394 aaKnown RBP14.67□□□□□ -0.06
VTN-203ENST00000542029 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
VTN-203ENST00000542029 SCNN1DP51172 638 aa14.66□□□□□ -0.06
VTN-203ENST00000542029 TNIP1Q15025 636 aa14.66□□□□□ -0.06
VTN-203ENST00000542029 CCDC184Q52MB2 194 aa14.66□□□□□ -0.06
VTN-203ENST00000542029 USP50Q70EL3 339 aaPredicted RBP14.66□□□□□ -0.06
VTN-203ENST00000542029 CNTROBQ8N137 903 aa14.66□□□□□ -0.06
VTN-203ENST00000542029 METTL22Q9BUU2 404 aaPredicted RBP14.66□□□□□ -0.06
VTN-203ENST00000542029 CWC25Q9NXE8 425 aaPredicted RBP14.66□□□□□ -0.06
VTN-203ENST00000542029 TMEM88BA6NKF7 163 aa14.65□□□□□ -0.06
VTN-203ENST00000542029 PCCAP05165 728 aaPredicted RBP14.65□□□□□ -0.06
VTN-203ENST00000542029 RPS8P62241 208 aaKnown RBP14.65□□□□□ -0.06
VTN-203ENST00000542029 CIAPIN1Q6FI81 312 aa14.65□□□□□ -0.06
VTN-203ENST00000542029 MYD88Q99836 296 aa14.65□□□□□ -0.06
VTN-203ENST00000542029 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
VTN-203ENST00000542029 CDHR2Q9BYE9 1310 aa14.65□□□□□ -0.06
VTN-203ENST00000542029 CXCL9Q07325 125 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 NEXNQ0ZGT2 675 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 CCDC152Q4G0S7 254 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
VTN-203ENST00000542029 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 CELF1Q92879 486 aaKnown RBP14.64□□□□□ -0.07
VTN-203ENST00000542029 EYA3Q99504 573 aa14.64□□□□□ -0.07
VTN-203ENST00000542029 ADARB2Q9NS39 739 aaKnown RBP14.64□□□□□ -0.07
VTN-203ENST00000542029 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
VTN-203ENST00000542029 PDE8AO60658 829 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 EPS15P42566 896 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 WASHC4Q2M389 1173 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 TWISTNBQ3B726 338 aaPredicted RBP14.63□□□□□ -0.07
VTN-203ENST00000542029 MAP1SQ66K74 1059 aaPredicted RBP14.63□□□□□ -0.07
VTN-203ENST00000542029 WDR63Q8IWG1 891 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 GPRC5DQ9NZD1 345 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 MAP3K2Q9Y2U5 619 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 SCN4AP35499 1836 aa14.63□□□□□ -0.07
VTN-203ENST00000542029 SLC51AQ86UW1 340 aa14.62□□□□□ -0.07
VTN-203ENST00000542029 TSR2Q969E8 191 aaKnown RBP14.62□□□□□ -0.07
VTN-203ENST00000542029 ZNF428Q96B54 188 aa14.62□□□□□ -0.07
VTN-203ENST00000542029 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
VTN-203ENST00000542029 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
VTN-203ENST00000542029 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 PI4KAP2A4QPH2 592 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 C6orf229H3BNL8 230 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 PI4KAP1Q8N8J0 262 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 ZC3H15Q8WU90 426 aaKnown RBP14.61□□□□□ -0.07
VTN-203ENST00000542029 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
VTN-203ENST00000542029 RAD17O75943 681 aa14.6□□□□□ -0.07
VTN-203ENST00000542029 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
VTN-203ENST00000542029 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
VTN-203ENST00000542029 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
VTN-203ENST00000542029 GMPSP49915 693 aaPredicted RBP14.6□□□□□ -0.07
VTN-203ENST00000542029 DPF2Q92785 391 aa14.6□□□□□ -0.07
VTN-203ENST00000542029 COL4A5P29400 1685 aa14.6□□□□□ -0.07
VTN-203ENST00000542029 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 H7C1D1 291 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 GPSM2P81274 684 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 ANKRD18AQ8IVF6 992 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 CDC5LQ99459 802 aaKnown RBP14.59□□□□□ -0.07
VTN-203ENST00000542029 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
VTN-203ENST00000542029 ANKIB1Q9P2G1 1089 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 POLLQ9UGP5 575 aa14.59□□□□□ -0.07
VTN-203ENST00000542029 IGKV5-2P06315 115 aa14.58□□□□□ -0.08
VTN-203ENST00000542029 RPS12P25398 132 aaKnown RBP14.58□□□□□ -0.08
VTN-203ENST00000542029 DEFB115Q30KQ5 88 aa14.58□□□□□ -0.08
VTN-203ENST00000542029 TBC1D16Q8TBP0 767 aa14.58□□□□□ -0.08
VTN-203ENST00000542029 SEC31BQ9NQW1 1179 aa14.58□□□□□ -0.08
VTN-203ENST00000542029 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
VTN-203ENST00000542029 YDJCA8MPS7 323 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 G3V3G9 751 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 CTSWP56202 376 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 FLIIQ13045 1269 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 DCAF8Q5TAQ9 597 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 MYH16Q9H6N6 1097 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 CNOT7Q9UIV1 285 aaKnown RBP14.57□□□□□ -0.08
VTN-203ENST00000542029 ABT1Q9ULW3 272 aaKnown RBP14.57□□□□□ -0.08
VTN-203ENST00000542029 FANCIQ9NVI1 1328 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 ANKRD36CQ5JPF3 1778 aa14.57□□□□□ -0.08
VTN-203ENST00000542029 NEURL1BA8MQ27 555 aa14.56□□□□□ -0.08
VTN-203ENST00000542029 RIMBP2O15034 1052 aa14.56□□□□□ -0.08
VTN-203ENST00000542029 UFL1O94874 794 aa14.56□□□□□ -0.08
VTN-203ENST00000542029 VEGFBP49765 207 aa14.56□□□□□ -0.08
VTN-203ENST00000542029 DBNDD1Q9H9R9 158 aa14.56□□□□□ -0.08
VTN-203ENST00000542029 H7C1W4 665 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 PSMD14O00487 310 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 ECE2O60344 883 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 VAMP4O75379 141 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 ECE1P42892 770 aa14.55□□□□□ -0.08
VTN-203ENST00000542029 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms