RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
NPIPB4-211ENST00000539318 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
NPIPB4-211ENST00000539318 TTLL11Q8NHH1 800 aa11.3□□□□□ -0.6
NPIPB4-211ENST00000539318 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
NPIPB4-211ENST00000539318 PIM2Q9P1W9 311 aa11.3□□□□□ -0.6
NPIPB4-211ENST00000539318 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 PDE3AQ14432 1141 aa11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 C7orf43Q8WVR3 580 aa11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-211ENST00000539318 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 MS4A1P11836 297 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 ALDH1B1P30837 517 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 C20orf194Q5TEA3 1177 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 UTRNP46939 3433 aa11.28□□□□□ -0.6
NPIPB4-211ENST00000539318 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 CTSWP56202 376 aa11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.612e-17■■■■□ 20.6
NPIPB4-211ENST00000539318 MEIS3Q99687 375 aa11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
NPIPB4-211ENST00000539318 BBOX1O75936 387 aa11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 SEC31BQ9NQW1 1179 aa11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 COL4A1P02462 1669 aa11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
NPIPB4-211ENST00000539318 CACNA1SQ13698 1873 aa11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 GNAI3P08754 354 aa11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 MVPQ14764 893 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 LMBR1LQ6UX01 489 aa11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 GREM2Q9H772 168 aa11.25□□□□□ -0.61
NPIPB4-211ENST00000539318 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 RPS8P62241 208 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 GRAPQ13588 217 aa11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-211ENST00000539318 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 MTX1Q13505 466 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 HDAC5Q9UQL6 1122 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 SNED1Q8TER0 1413 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
NPIPB4-211ENST00000539318 C21orf2O43822 256 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 SBF1O95248 1867 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 ITGA6P23229 1130 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 GPR162Q16538 588 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
NPIPB4-211ENST00000539318 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 GNAI2P04899 355 aa11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 IFIT5Q13325 482 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 TMC4Q7Z404 712 aa11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-211ENST00000539318 ANKRD18BA2A2Z9 1011 aa11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 ATP8B2P98198 1209 aa11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 ZNF594Q96JF6 807 aaPredicted RBP11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-211ENST00000539318 LRRC37AA6NMS7 1700 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 NFKBIEO00221 500 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 PRELPP51888 382 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 POLA2Q14181 598 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 SOGA3Q5TF21 947 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 MINPP1Q9UNW1 487 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 RIPOR2Q9Y4F9 1068 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 CHD4Q14839 1912 aa11.19□□□□□ -0.62
NPIPB4-211ENST00000539318 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms