RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MYH3P11055 1940 aa22.02■■□□□ 1.11
SFSWAP-205ENST00000537164 E9PSI1 815 aa22.01■■□□□ 1.11
SFSWAP-205ENST00000537164 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
SFSWAP-205ENST00000537164 SLC51AQ86UW1 340 aa22.01■■□□□ 1.11
SFSWAP-205ENST00000537164 RTFDC1Q9BY42 306 aaPredicted RBP22.01■■□□□ 1.11
SFSWAP-205ENST00000537164 VPS33BQ9H267 617 aa22.01■■□□□ 1.11
SFSWAP-205ENST00000537164 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
SFSWAP-205ENST00000537164 POTECB2RU33 542 aa22■■□□□ 1.11
SFSWAP-205ENST00000537164 VEGFAP15692 232 aaPredicted RBP22■■□□□ 1.11
SFSWAP-205ENST00000537164 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
SFSWAP-205ENST00000537164 TMX4Q9H1E5 349 aaPredicted RBP22■■□□□ 1.11
SFSWAP-205ENST00000537164 COL4A1P02462 1669 aa22■■□□□ 1.11
SFSWAP-205ENST00000537164 COL4A5P29400 1685 aa22■■□□□ 1.11
SFSWAP-205ENST00000537164 FZD9O00144 591 aa21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 PDE8AO60658 829 aa21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 SLFN5Q08AF3 891 aa21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 FKBP5Q13451 457 aaPredicted RBP21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 DNAAF4Q8WXU2 420 aa21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 SCN4AP35499 1836 aa21.99■■□□□ 1.11
SFSWAP-205ENST00000537164 CWF19L2Q2TBE0 894 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-205ENST00000537164 DUOX1Q9NRD9 1551 aa21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 LINS1Q8NG48 757 aa21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 CELF1Q92879 486 aaKnown RBP21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 L3MBTL3Q96JM7 780 aaPredicted RBP21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 LTBP1Q14766 1721 aa21.97■■□□□ 1.11
SFSWAP-205ENST00000537164 H7C1W4 665 aa21.96■■□□□ 1.11
SFSWAP-205ENST00000537164 DDNO94850 711 aaPredicted RBP21.96■■□□□ 1.11
SFSWAP-205ENST00000537164 C16orf71Q8IYS4 520 aaPredicted RBP21.96■■□□□ 1.11
SFSWAP-205ENST00000537164 SUPT20HQ8NEM7 779 aa21.96■■□□□ 1.11
SFSWAP-205ENST00000537164 JDP2Q8WYK2 163 aa21.96■■□□□ 1.11
SFSWAP-205ENST00000537164 GCKRQ14397 625 aa21.95■■□□□ 1.1
SFSWAP-205ENST00000537164 CCDC152Q4G0S7 254 aa21.95■■□□□ 1.1
SFSWAP-205ENST00000537164 MPNDQ8N594 471 aa21.95■■□□□ 1.1
SFSWAP-205ENST00000537164 HSPA6P17066 643 aa21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 RPS8P62241 208 aaKnown RBP21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 FSTL1Q12841 308 aa21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 JARID2Q92833 1246 aaPredicted RBP21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 ZNF541Q9H0D2 1346 aa21.94■■□□□ 1.1
SFSWAP-205ENST00000537164 CASP7P55210 303 aa21.93■■□□□ 1.1
SFSWAP-205ENST00000537164 LARGE2Q8N3Y3 721 aa21.93■■□□□ 1.1
SFSWAP-205ENST00000537164 RTL9Q8NET4 1388 aa21.93■■□□□ 1.1
SFSWAP-205ENST00000537164 PLA2G12BQ9BX93 195 aa21.93■■□□□ 1.1
SFSWAP-205ENST00000537164 CTSWP56202 376 aa21.92■■□□□ 1.1
SFSWAP-205ENST00000537164 BEND3Q5T5X7 828 aa21.92■■□□□ 1.1
SFSWAP-205ENST00000537164 GPC2Q8N158 579 aa21.92■■□□□ 1.1
SFSWAP-205ENST00000537164 TTLL11Q8NHH1 800 aa21.92■■□□□ 1.1
SFSWAP-205ENST00000537164 SEC31BQ9NQW1 1179 aa21.92■■□□□ 1.1
SFSWAP-205ENST00000537164 PPIP5K2O43314 1243 aa21.91■■□□□ 1.1
SFSWAP-205ENST00000537164 KIAA2012Q0VF49 1180 aa21.91■■□□□ 1.1
SFSWAP-205ENST00000537164 UBE3BQ7Z3V4 1068 aa21.91■■□□□ 1.1
SFSWAP-205ENST00000537164 MIER1Q8N108 512 aa21.91■■□□□ 1.1
SFSWAP-205ENST00000537164 CDCA7LQ96GN5 454 aa21.91■■□□□ 1.1
SFSWAP-205ENST00000537164 IQCA1LA6NCM1 817 aa21.9■■□□□ 1.1
SFSWAP-205ENST00000537164 F6X3S4 739 aa21.9■■□□□ 1.1
SFSWAP-205ENST00000537164 AOC3Q16853 763 aa21.9■■□□□ 1.1
SFSWAP-205ENST00000537164 EIF6P56537 245 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-205ENST00000537164 MRPL50Q8N5N7 158 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-205ENST00000537164 SMC1BQ8NDV3 1235 aa21.89■■□□□ 1.09
SFSWAP-205ENST00000537164 PODXL2Q9NZ53 605 aa21.89■■□□□ 1.09
SFSWAP-205ENST00000537164 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-205ENST00000537164 NIM1KQ8IY84 436 aa21.88■■□□□ 1.09
SFSWAP-205ENST00000537164 CSF1RP07333 972 aa21.87■■□□□ 1.09
SFSWAP-205ENST00000537164 ALDH1L2Q3SY69 923 aa21.87■■□□□ 1.09
SFSWAP-205ENST00000537164 ZNRF3Q9ULT6 936 aa21.87■■□□□ 1.09
SFSWAP-205ENST00000537164 NSFL1CQ9UNZ2 370 aaKnown RBP21.87■■□□□ 1.09
SFSWAP-205ENST00000537164 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
SFSWAP-205ENST00000537164 GPSM2P81274 684 aa21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 ANKRD18AQ8IVF6 992 aa21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 TAF1DQ9H5J8 278 aaPredicted RBP21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 GREM2Q9H772 168 aa21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 POLLQ9UGP5 575 aa21.86■■□□□ 1.09
SFSWAP-205ENST00000537164 SPEF2Q9C093 1822 aa21.85■■□□□ 1.09
SFSWAP-205ENST00000537164 PTPRCP08575 1304 aa21.85■■□□□ 1.09
SFSWAP-205ENST00000537164 ALDH1L1O75891 902 aa21.85■■□□□ 1.09
SFSWAP-205ENST00000537164 CCDC85AQ96PX6 553 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-205ENST00000537164 APLP1P51693 650 aa21.84■■□□□ 1.09
SFSWAP-205ENST00000537164 WASHC4Q2M389 1173 aa21.84■■□□□ 1.09
SFSWAP-205ENST00000537164 TBC1D16Q8TBP0 767 aa21.84■■□□□ 1.09
SFSWAP-205ENST00000537164 BSDC1Q9NW68 430 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-205ENST00000537164 HACL1Q9UJ83 578 aa21.84■■□□□ 1.09
SFSWAP-205ENST00000537164 CXCL9Q07325 125 aa21.83■■□□□ 1.09
SFSWAP-205ENST00000537164 GRM8O00222 908 aa21.82■■□□□ 1.08
SFSWAP-205ENST00000537164 SCNN1DP51172 638 aa21.82■■□□□ 1.08
SFSWAP-205ENST00000537164 BRPF1P55201 1214 aaPredicted RBP21.82■■□□□ 1.08
SFSWAP-205ENST00000537164 EYA3Q99504 573 aa21.82■■□□□ 1.08
SFSWAP-205ENST00000537164 SRCIN1Q9C0H9 1055 aa21.82■■□□□ 1.08
SFSWAP-205ENST00000537164 XDHP47989 1333 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 C6orf229H3BNL8 230 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 POTEIP0CG38 1075 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 POTEJP0CG39 1038 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 EPHX2P34913 555 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 FOXO4P98177 505 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 PNMA8AQ86V59 439 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 LDHDQ86WU2 507 aa21.81■■□□□ 1.08
SFSWAP-205ENST00000537164 GJA3Q9Y6H8 435 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms