RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 CACNA1FO60840 1977 aa20.7■□□□□ 0.9
RELA-216ENST00000531238 PDE8AO60658 829 aa20.7■□□□□ 0.9
RELA-216ENST00000531238 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
RELA-216ENST00000531238 TAF1P21675 1872 aa20.7■□□□□ 0.9
RELA-216ENST00000531238 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
RELA-216ENST00000531238 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
RELA-216ENST00000531238 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
RELA-216ENST00000531238 CCDC85AQ96PX6 553 aaPredicted RBP20.69■□□□□ 0.9
RELA-216ENST00000531238 UBE3BQ7Z3V4 1068 aa20.68■□□□□ 0.9
RELA-216ENST00000531238 PSMD1Q99460 953 aa20.68■□□□□ 0.9
RELA-216ENST00000531238 CCDC88AQ3V6T2 1871 aa20.68■□□□□ 0.9
RELA-216ENST00000531238 ALDH1L2Q3SY69 923 aa20.67■□□□□ 0.9
RELA-216ENST00000531238 TTLL11Q8NHH1 800 aa20.67■□□□□ 0.9
RELA-216ENST00000531238 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
RELA-216ENST00000531238 KIF3CO14782 793 aa20.66■□□□□ 0.9
RELA-216ENST00000531238 SLC4A10Q6U841 1118 aa20.66■□□□□ 0.9
RELA-216ENST00000531238 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
RELA-216ENST00000531238 CTSWP56202 376 aa20.65■□□□□ 0.9
RELA-216ENST00000531238 RPS8P62241 208 aaKnown RBP20.65■□□□□ 0.9
RELA-216ENST00000531238 ZC3H4Q9UPT8 1303 aaKnown RBP20.64■□□□□ 0.89
RELA-216ENST00000531238 GLTPD2A6NH11 291 aa20.64■□□□□ 0.89
RELA-216ENST00000531238 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
RELA-216ENST00000531238 HSP90B1P14625 803 aaKnown RBP20.64■□□□□ 0.89
RELA-216ENST00000531238 RARSP54136 660 aaKnown RBP20.64■□□□□ 0.89
RELA-216ENST00000531238 CCDC152Q4G0S7 254 aa20.64■□□□□ 0.89
RELA-216ENST00000531238 PLA2G12BQ9BX93 195 aa20.64■□□□□ 0.89
RELA-216ENST00000531238 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
RELA-216ENST00000531238 POTECB2RU33 542 aa20.63■□□□□ 0.89
RELA-216ENST00000531238 CSF1RP07333 972 aa20.63■□□□□ 0.89
RELA-216ENST00000531238 GRIPAP1Q4V328 841 aa20.63■□□□□ 0.89
RELA-216ENST00000531238 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
RELA-216ENST00000531238 GREM2Q9H772 168 aa20.63■□□□□ 0.89
RELA-216ENST00000531238 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
RELA-216ENST00000531238 PTPRCP08575 1304 aa20.62■□□□□ 0.89
RELA-216ENST00000531238 COL4A5P29400 1685 aa20.62■□□□□ 0.89
RELA-216ENST00000531238 FOXO4P98177 505 aa20.62■□□□□ 0.89
RELA-216ENST00000531238 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
RELA-216ENST00000531238 MPNDQ8N594 471 aa20.62■□□□□ 0.89
RELA-216ENST00000531238 NOB1Q9ULX3 412 aaKnown RBP20.62■□□□□ 0.89
RELA-216ENST00000531238 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
RELA-216ENST00000531238 DDNO94850 711 aaPredicted RBP20.61■□□□□ 0.89
RELA-216ENST00000531238 BRPF1P55201 1214 aaPredicted RBP20.61■□□□□ 0.89
RELA-216ENST00000531238 GPSM2P81274 684 aa20.61■□□□□ 0.89
RELA-216ENST00000531238 DPP8Q6V1X1 898 aaPredicted RBP20.61■□□□□ 0.89
RELA-216ENST00000531238 SRCIN1Q9C0H9 1055 aa20.61■□□□□ 0.89
RELA-216ENST00000531238 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
RELA-216ENST00000531238 FZD9O00144 591 aa20.6■□□□□ 0.89
RELA-216ENST00000531238 GRM8O00222 908 aa20.6■□□□□ 0.89
RELA-216ENST00000531238 TMC4Q7Z404 712 aa20.6■□□□□ 0.89
RELA-216ENST00000531238 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
RELA-216ENST00000531238 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
RELA-216ENST00000531238 AOC3Q16853 763 aa20.59■□□□□ 0.89
RELA-216ENST00000531238 KAZALD1Q96I82 304 aa20.59■□□□□ 0.89
RELA-216ENST00000531238 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
RELA-216ENST00000531238 POLLQ9UGP5 575 aa20.59■□□□□ 0.89
RELA-216ENST00000531238 NSFL1CQ9UNZ2 370 aaKnown RBP20.59■□□□□ 0.89
RELA-216ENST00000531238 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.89
RELA-216ENST00000531238 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
RELA-216ENST00000531238 WTIPA6NIX2 430 aaPredicted RBP20.58■□□□□ 0.89
RELA-216ENST00000531238 BCAR3O75815 825 aa20.58■□□□□ 0.89
RELA-216ENST00000531238 NBPF7P0C2Y1 421 aaPredicted RBP20.58■□□□□ 0.89
RELA-216ENST00000531238 DPY19L2Q6NUT2 758 aa20.58■□□□□ 0.89
RELA-216ENST00000531238 TIAM2Q8IVF5 1701 aa20.57■□□□□ 0.88
RELA-216ENST00000531238 ANKRD18AQ8IVF6 992 aa20.57■□□□□ 0.88
RELA-216ENST00000531238 LARGE2Q8N3Y3 721 aa20.57■□□□□ 0.88
RELA-216ENST00000531238 SUCLG2Q96I99 432 aa20.57■□□□□ 0.88
RELA-216ENST00000531238 GPR101Q96P66 508 aaPredicted RBP20.57■□□□□ 0.88
RELA-216ENST00000531238 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
RELA-216ENST00000531238 RTL9Q8NET4 1388 aa20.57■□□□□ 0.88
RELA-216ENST00000531238 UTYO14607 1347 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 PPIP5K2O43314 1243 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 ITGA6P23229 1130 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
RELA-216ENST00000531238 DUOX1Q9NRD9 1551 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 LMBR1LQ6UX01 489 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 SUPT20HQ8NEM7 779 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
RELA-216ENST00000531238 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 MINPP1Q9UNW1 487 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 TNNQ9UQP3 1299 aa20.55■□□□□ 0.88
RELA-216ENST00000531238 LRRC37AA6NMS7 1700 aa20.54■□□□□ 0.88
RELA-216ENST00000531238 JDP2Q8WYK2 163 aa20.54■□□□□ 0.88
RELA-216ENST00000531238 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
RELA-216ENST00000531238 RIMBP2O15034 1052 aa20.53■□□□□ 0.88
RELA-216ENST00000531238 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
RELA-216ENST00000531238 C6orf229H3BNL8 230 aa20.52■□□□□ 0.88
RELA-216ENST00000531238 TOMM70O94826 608 aa20.52■□□□□ 0.88
RELA-216ENST00000531238 YDJCA8MPS7 323 aa20.51■□□□□ 0.87
RELA-216ENST00000531238 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
RELA-216ENST00000531238 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
RELA-216ENST00000531238 ARHGAP45Q92619 1136 aa20.51■□□□□ 0.87
RELA-216ENST00000531238 ZNF594Q96JF6 807 aaPredicted RBP20.51■□□□□ 0.87
RELA-216ENST00000531238 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
RELA-216ENST00000531238 API5Q9BZZ5 524 aaKnown RBP20.51■□□□□ 0.87
RELA-216ENST00000531238 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
RELA-216ENST00000531238 ZNRF3Q9ULT6 936 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms