RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 METTL22Q9BUU2 404 aaPredicted RBP29.74■■■□□ 2.35
PKP3-206ENST00000528036 PPIP5K2O43314 1243 aa29.73■■■□□ 2.35
PKP3-206ENST00000528036 TSPYL6Q8N831 410 aa29.73■■■□□ 2.35
PKP3-206ENST00000528036 CWC25Q9NXE8 425 aaPredicted RBP29.73■■■□□ 2.35
PKP3-206ENST00000528036 KSR2Q6VAB6 950 aa29.72■■■□□ 2.35
PKP3-206ENST00000528036 MYD88Q99836 296 aa29.72■■■□□ 2.35
PKP3-206ENST00000528036 SCN4AP35499 1836 aa29.72■■■□□ 2.35
PKP3-206ENST00000528036 PCCAP05165 728 aaPredicted RBP29.71■■■□□ 2.35
PKP3-206ENST00000528036 NEXNQ0ZGT2 675 aa29.71■■■□□ 2.35
PKP3-206ENST00000528036 KLRG1Q96E93 195 aa29.71■■■□□ 2.35
PKP3-206ENST00000528036 LMOD1P29536 600 aaPredicted RBP29.7■■■□□ 2.35
PKP3-206ENST00000528036 EPHX2P34913 555 aa29.7■■■□□ 2.35
PKP3-206ENST00000528036 ZNRF3Q9ULT6 936 aa29.69■■■□□ 2.34
PKP3-206ENST00000528036 KIAA2012Q0VF49 1180 aa29.68■■■□□ 2.34
PKP3-206ENST00000528036 AOC3Q16853 763 aa29.67■■■□□ 2.34
PKP3-206ENST00000528036 CCDC152Q4G0S7 254 aa29.67■■■□□ 2.34
PKP3-206ENST00000528036 MAP3K2Q9Y2U5 619 aa29.67■■■□□ 2.34
PKP3-206ENST00000528036 GJA3Q9Y6H8 435 aa29.67■■■□□ 2.34
PKP3-206ENST00000528036 PDE8AO60658 829 aa29.66■■■□□ 2.34
PKP3-206ENST00000528036 RPS8P62241 208 aaKnown RBP29.66■■■□□ 2.34
PKP3-206ENST00000528036 PI4KAP2A4QPH2 592 aa29.65■■■□□ 2.34
PKP3-206ENST00000528036 SLC4A2P04920 1241 aa29.65■■■□□ 2.34
PKP3-206ENST00000528036 RTL5Q5HYW3 569 aaPredicted RBP29.65■■■□□ 2.34
PKP3-206ENST00000528036 PI4KAP1Q8N8J0 262 aa29.65■■■□□ 2.34
PKP3-206ENST00000528036 FANCIQ9NVI1 1328 aa29.65■■■□□ 2.34
PKP3-206ENST00000528036 EAPPQ56P03 285 aaPredicted RBP29.64■■■□□ 2.34
PKP3-206ENST00000528036 JMYQ8N9B5 988 aa29.64■■■□□ 2.34
PKP3-206ENST00000528036 MYH16Q9H6N6 1097 aa29.64■■■□□ 2.34
PKP3-206ENST00000528036 CLEC11AQ9Y240 323 aa29.64■■■□□ 2.34
PKP3-206ENST00000528036 CDHR2Q9BYE9 1310 aa29.64■■■□□ 2.34
PKP3-206ENST00000528036 LAMB2P55268 1798 aa29.63■■■□□ 2.33
PKP3-206ENST00000528036 TNIP1Q15025 636 aa29.63■■■□□ 2.33
PKP3-206ENST00000528036 FAM9BQ8IZU0 186 aa29.63■■■□□ 2.33
PKP3-206ENST00000528036 CELF1Q92879 486 aaKnown RBP29.63■■■□□ 2.33
PKP3-206ENST00000528036 CREBZFQ9NS37 354 aa29.63■■■□□ 2.33
PKP3-206ENST00000528036 EYA3Q99504 573 aa29.62■■■□□ 2.33
PKP3-206ENST00000528036 POTEIP0CG38 1075 aa29.61■■■□□ 2.33
PKP3-206ENST00000528036 POTEJP0CG39 1038 aa29.61■■■□□ 2.33
PKP3-206ENST00000528036 ZNF428Q96B54 188 aa29.61■■■□□ 2.33
PKP3-206ENST00000528036 NSFL1CQ9UNZ2 370 aaKnown RBP29.61■■■□□ 2.33
PKP3-206ENST00000528036 DDX60Q8IY21 1712 aaKnown RBP29.6■■■□□ 2.33
PKP3-206ENST00000528036 HTRA3P83110 453 aa29.6■■■□□ 2.33
PKP3-206ENST00000528036 WASHC4Q2M389 1173 aa29.6■■■□□ 2.33
PKP3-206ENST00000528036 USP50Q70EL3 339 aaPredicted RBP29.6■■■□□ 2.33
PKP3-206ENST00000528036 SALL2Q9Y467 1007 aaPredicted RBP29.6■■■□□ 2.33
PKP3-206ENST00000528036 VAMP4O75379 141 aa29.59■■■□□ 2.33
PKP3-206ENST00000528036 FLIIQ13045 1269 aa29.59■■■□□ 2.33
PKP3-206ENST00000528036 CIAPIN1Q6FI81 312 aa29.59■■■□□ 2.33
PKP3-206ENST00000528036 COL4A5P29400 1685 aa29.59■■■□□ 2.33
PKP3-206ENST00000528036 SCNN1DP51172 638 aa29.58■■■□□ 2.33
PKP3-206ENST00000528036 CXCL9Q07325 125 aa29.58■■■□□ 2.33
PKP3-206ENST00000528036 PASKQ96RG2 1323 aa29.58■■■□□ 2.33
PKP3-206ENST00000528036 IGKV5-2P06315 115 aa29.57■■■□□ 2.32
PKP3-206ENST00000528036 SLC51AQ86UW1 340 aa29.57■■■□□ 2.32
PKP3-206ENST00000528036 CDC5LQ99459 802 aaKnown RBP29.57■■■□□ 2.32
PKP3-206ENST00000528036 PODXL2Q9NZ53 605 aa29.57■■■□□ 2.32
PKP3-206ENST00000528036 C6orf229H3BNL8 230 aa29.56■■■□□ 2.32
PKP3-206ENST00000528036 FKBP5Q13451 457 aaPredicted RBP29.56■■■□□ 2.32
PKP3-206ENST00000528036 ADARB2Q9NS39 739 aaKnown RBP29.56■■■□□ 2.32
PKP3-206ENST00000528036 NEURL1BA8MQ27 555 aa29.55■■■□□ 2.32
PKP3-206ENST00000528036 ITGBL1O95965 494 aaPredicted RBP29.55■■■□□ 2.32
PKP3-206ENST00000528036 EXOSC9Q06265 439 aaKnown RBP29.55■■■□□ 2.32
PKP3-206ENST00000528036 ANKRD18AQ8IVF6 992 aa29.55■■■□□ 2.32
PKP3-206ENST00000528036 CNTROBQ8N137 903 aa29.55■■■□□ 2.32
PKP3-206ENST00000528036 GPRC5DQ9NZD1 345 aa29.55■■■□□ 2.32
PKP3-206ENST00000528036 CTSWP56202 376 aa29.54■■■□□ 2.32
PKP3-206ENST00000528036 GPSM2P81274 684 aa29.54■■■□□ 2.32
PKP3-206ENST00000528036 G2E3Q7L622 706 aa29.54■■■□□ 2.32
PKP3-206ENST00000528036 DNAAF4Q8WXU2 420 aa29.54■■■□□ 2.32
PKP3-206ENST00000528036 LRRC37AA6NMS7 1700 aa29.54■■■□□ 2.32
PKP3-206ENST00000528036 EPS15P42566 896 aa29.53■■■□□ 2.32
PKP3-206ENST00000528036 LINS1Q8NG48 757 aa29.53■■■□□ 2.32
PKP3-206ENST00000528036 BCL2L13Q9BXK5 485 aa29.53■■■□□ 2.32
PKP3-206ENST00000528036 ZC3H12CQ9C0D7 883 aaKnown RBP29.53■■■□□ 2.32
PKP3-206ENST00000528036 TMEM88BA6NKF7 163 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 H7C1W4 665 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 SEC31BQ9NQW1 1179 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 ANKIB1Q9P2G1 1089 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 POLLQ9UGP5 575 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 RTL9Q8NET4 1388 aa29.52■■■□□ 2.32
PKP3-206ENST00000528036 TBC1D16Q8TBP0 767 aa29.51■■■□□ 2.31
PKP3-206ENST00000528036 GGA1Q9UJY5 639 aa29.51■■■□□ 2.31
PKP3-206ENST00000528036 GMPSP49915 693 aaPredicted RBP29.5■■■□□ 2.31
PKP3-206ENST00000528036 GCKRQ14397 625 aa29.5■■■□□ 2.31
PKP3-206ENST00000528036 CWF19L2Q2TBE0 894 aaKnown RBP29.5■■■□□ 2.31
PKP3-206ENST00000528036 TTLL11Q8NHH1 800 aa29.5■■■□□ 2.31
PKP3-206ENST00000528036 PLA2G12BQ9BX93 195 aa29.5■■■□□ 2.31
PKP3-206ENST00000528036 RAD17O75943 681 aa29.49■■■□□ 2.31
PKP3-206ENST00000528036 MAP1SQ66K74 1059 aaPredicted RBP29.49■■■□□ 2.31
PKP3-206ENST00000528036 DPF2Q92785 391 aa29.49■■■□□ 2.31
PKP3-206ENST00000528036 CACNA1FO60840 1977 aa29.49■■■□□ 2.31
PKP3-206ENST00000528036 ADAMTSL1Q8N6G6 1762 aa29.49■■■□□ 2.31
PKP3-206ENST00000528036 G3V3G9 751 aa29.48■■■□□ 2.31
PKP3-206ENST00000528036 H7C1D1 291 aa29.48■■■□□ 2.31
PKP3-206ENST00000528036 RPS12P25398 132 aaKnown RBP29.48■■■□□ 2.31
PKP3-206ENST00000528036 DCAF8Q5TAQ9 597 aa29.48■■■□□ 2.31
PKP3-206ENST00000528036 ZC3H15Q8WU90 426 aaKnown RBP29.48■■■□□ 2.31
PKP3-206ENST00000528036 JARID2Q92833 1246 aaPredicted RBP29.48■■■□□ 2.31
PKP3-206ENST00000528036 DUOX1Q9NRD9 1551 aa29.47■■■□□ 2.31
PKP3-206ENST00000528036 XDHP47989 1333 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms