RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, human

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSSCA1-205	ENST00000527920	G2E3	Q7L622	706 aa		42.34	■■■■■ 4.37
SSSCA1-205	ENST00000527920	VPS33B	Q9H267	617 aa		42.34	■■■■■ 4.37
SSSCA1-205	ENST00000527920	FZD9	O00144	591 aa		42.33	■■■■■ 4.37
SSSCA1-205	ENST00000527920	RTL5	Q5HYW3	569 aa	Predicted RBP	42.33	■■■■■ 4.37
SSSCA1-205	ENST00000527920	SLC51A	Q86UW1	340 aa		42.33	■■■■■ 4.37
SSSCA1-205	ENST00000527920	RTFDC1	Q9BY42	306 aa	Predicted RBP	42.33	■■■■■ 4.37
SSSCA1-205	ENST00000527920	DDN	O94850	711 aa	Predicted RBP	42.32	■■■■■ 4.37
SSSCA1-205	ENST00000527920	JDP2	Q8WYK2	163 aa		42.32	■■■■■ 4.37
SSSCA1-205	ENST00000527920	L3MBTL3	Q96JM7	780 aa	Predicted RBP	42.32	■■■■■ 4.37
SSSCA1-205	ENST00000527920	CACNA1F	O60840	1977 aa		42.31	■■■■■ 4.36
SSSCA1-205	ENST00000527920	IGKV5-2	P06315	115 aa		42.31	■■■■■ 4.36
SSSCA1-205	ENST00000527920	SUPT20H	Q8NEM7	779 aa		42.3	■■■■■ 4.36
SSSCA1-205	ENST00000527920	CDHR2	Q9BYE9	1310 aa		42.28	■■■■■ 4.36
SSSCA1-205	ENST00000527920	ZNF541	Q9H0D2	1346 aa		42.28	■■■■■ 4.36
SSSCA1-205	ENST00000527920	SMC1B	Q8NDV3	1235 aa		42.28	■■■■■ 4.36
SSSCA1-205	ENST00000527920	PDE8A	O60658	829 aa		42.26	■■■■■ 4.36
SSSCA1-205	ENST00000527920	DPP8	Q6V1X1	898 aa	Predicted RBP	42.26	■■■■■ 4.36
SSSCA1-205	ENST00000527920	LARGE2	Q8N3Y3	721 aa		42.26	■■■■■ 4.36
SSSCA1-205	ENST00000527920	MPND	Q8N594	471 aa		42.26	■■■■■ 4.36
SSSCA1-205	ENST00000527920	IQCA1L	A6NCM1	817 aa		42.25	■■■■■ 4.35
SSSCA1-205	ENST00000527920	FKBP5	Q13451	457 aa	Predicted RBP	42.25	■■■■■ 4.35
SSSCA1-205	ENST00000527920	LRRC37A	A6NMS7	1700 aa		42.25	■■■■■ 4.35
SSSCA1-205	ENST00000527920	COL4A5	P29400	1685 aa		42.25	■■■■■ 4.35
SSSCA1-205	ENST00000527920	NEURL1B	A8MQ27	555 aa		42.24	■■■■■ 4.35
SSSCA1-205	ENST00000527920	CELF1	Q92879	486 aa	Known RBP	42.24	■■■■■ 4.35
SSSCA1-205	ENST00000527920	CCDC152	Q4G0S7	254 aa		42.23	■■■■■ 4.35
SSSCA1-205	ENST00000527920	APLP1	P51693	650 aa		42.22	■■■■■ 4.35
SSSCA1-205	ENST00000527920	GPC2	Q8N158	579 aa		42.22	■■■■■ 4.35
SSSCA1-205	ENST00000527920	DNAAF4	Q8WXU2	420 aa		42.22	■■■■■ 4.35
SSSCA1-205	ENST00000527920	CEP350	Q5VT06	3117 aa		42.21	■■■■■ 4.35
SSSCA1-205	ENST00000527920	PPIP5K2	O43314	1243 aa		42.21	■■■■■ 4.35
SSSCA1-205	ENST00000527920	CWF19L2	Q2TBE0	894 aa	Known RBP	42.21	■■■■■ 4.35
SSSCA1-205	ENST00000527920		E9PSI1	815 aa		42.2	■■■■■ 4.35
SSSCA1-205	ENST00000527920	EIF6	P56537	245 aa	Known RBP	42.2	■■■■■ 4.35
SSSCA1-205	ENST00000527920	NIM1K	Q8IY84	436 aa		42.2	■■■■■ 4.35
SSSCA1-205	ENST00000527920	RPS8	P62241	208 aa	Known RBP	42.19	■■■■■ 4.34
SSSCA1-205	ENST00000527920	TAF1	P21675	1872 aa		42.19	■■■■■ 4.34
SSSCA1-205	ENST00000527920	AOC3	Q16853	763 aa		42.18	■■■■■ 4.34
SSSCA1-205	ENST00000527920	LINS1	Q8NG48	757 aa		42.18	■■■■■ 4.34
SSSCA1-205	ENST00000527920	SCN4A	P35499	1836 aa		42.18	■■■■■ 4.34
SSSCA1-205	ENST00000527920	KIAA2012	Q0VF49	1180 aa		42.17	■■■■■ 4.34
SSSCA1-205	ENST00000527920	JARID2	Q92833	1246 aa	Predicted RBP	42.17	■■■■■ 4.34
SSSCA1-205	ENST00000527920		H7C1W4	665 aa		42.16	■■■■■ 4.34
SSSCA1-205	ENST00000527920	DUOX1	Q9NRD9	1551 aa		42.15	■■■■■ 4.34
SSSCA1-205	ENST00000527920	CTSW	P56202	376 aa		42.15	■■■■■ 4.34
SSSCA1-205	ENST00000527920	GCKR	Q14397	625 aa		42.15	■■■■■ 4.34
SSSCA1-205	ENST00000527920	COL4A1	P02462	1669 aa		42.15	■■■■■ 4.34
SSSCA1-205	ENST00000527920	TAF1D	Q9H5J8	278 aa	Predicted RBP	42.14	■■■■■ 4.34
SSSCA1-205	ENST00000527920	SEC31B	Q9NQW1	1179 aa		42.14	■■■■■ 4.34
SSSCA1-205	ENST00000527920	HACL1	Q9UJ83	578 aa		42.13	■■■■■ 4.33
SSSCA1-205	ENST00000527920	ZNRF3	Q9ULT6	936 aa		42.12	■■■■■ 4.33
SSSCA1-205	ENST00000527920	RTL9	Q8NET4	1388 aa		42.12	■■■■■ 4.33
SSSCA1-205	ENST00000527920	UBE3B	Q7Z3V4	1068 aa		42.11	■■■■■ 4.33
SSSCA1-205	ENST00000527920	SLFN5	Q08AF3	891 aa		42.1	■■■■■ 4.33
SSSCA1-205	ENST00000527920	PLA2G12B	Q9BX93	195 aa		42.1	■■■■■ 4.33
SSSCA1-205	ENST00000527920	NSFL1C	Q9UNZ2	370 aa	Known RBP	42.1	■■■■■ 4.33
SSSCA1-205	ENST00000527920	TTLL11	Q8NHH1	800 aa		42.09	■■■■■ 4.33
SSSCA1-205	ENST00000527920	PODXL2	Q9NZ53	605 aa		42.08	■■■■■ 4.33
SSSCA1-205	ENST00000527920	LTBP1	Q14766	1721 aa		42.07	■■■■■ 4.33
SSSCA1-205	ENST00000527920	CASP7	P55210	303 aa		42.07	■■■■■ 4.33
SSSCA1-205	ENST00000527920	GPSM2	P81274	684 aa		42.07	■■■■■ 4.33
SSSCA1-205	ENST00000527920	CHADL	Q6NUI6	762 aa		42.07	■■■■■ 4.33
SSSCA1-205	ENST00000527920	BEND3	Q5T5X7	828 aa		42.06	■■■■■ 4.32
SSSCA1-205	ENST00000527920	LDHD	Q86WU2	507 aa		42.06	■■■■■ 4.32
SSSCA1-205	ENST00000527920	CDC5L	Q99459	802 aa	Known RBP	42.06	■■■■■ 4.32
SSSCA1-205	ENST00000527920	GJA3	Q9Y6H8	435 aa		42.06	■■■■■ 4.32
SSSCA1-205	ENST00000527920	EPHX2	P34913	555 aa		42.05	■■■■■ 4.32
SSSCA1-205	ENST00000527920	ANKRD18A	Q8IVF6	992 aa		42.05	■■■■■ 4.32
SSSCA1-205	ENST00000527920		F6X3S4	739 aa		42.04	■■■■■ 4.32
SSSCA1-205	ENST00000527920	PNMA8A	Q86V59	439 aa	Predicted RBP	42.04	■■■■■ 4.32
SSSCA1-205	ENST00000527920	CCDC85A	Q96PX6	553 aa	Predicted RBP	42.04	■■■■■ 4.32
SSSCA1-205	ENST00000527920	POLL	Q9UGP5	575 aa		42.04	■■■■■ 4.32
SSSCA1-205	ENST00000527920	WASHC4	Q2M389	1173 aa		42.03	■■■■■ 4.32
SSSCA1-205	ENST00000527920	POTEI	P0CG38	1075 aa		42.02	■■■■■ 4.32
SSSCA1-205	ENST00000527920	POTEJ	P0CG39	1038 aa		42.02	■■■■■ 4.32
SSSCA1-205	ENST00000527920	CXCL9	Q07325	125 aa		42.02	■■■■■ 4.32
SSSCA1-205	ENST00000527920	EYA3	Q99504	573 aa		42.02	■■■■■ 4.32
SSSCA1-205	ENST00000527920	MYH3	P11055	1940 aa		42.02	■■■■■ 4.32
SSSCA1-205	ENST00000527920	SCNN1D	P51172	638 aa		42.01	■■■■■ 4.32
SSSCA1-205	ENST00000527920	TBC1D16	Q8TBP0	767 aa		42.01	■■■■■ 4.32
SSSCA1-205	ENST00000527920	GREM2	Q9H772	168 aa		42.01	■■■■■ 4.32
SSSCA1-205	ENST00000527920	C6orf229	H3BNL8	230 aa		42	■■■■■ 4.31
SSSCA1-205	ENST00000527920	LMOD1	P29536	600 aa	Predicted RBP	42	■■■■■ 4.31
SSSCA1-205	ENST00000527920	TRMT2A	Q8IZ69	625 aa	Known RBP	42	■■■■■ 4.31
SSSCA1-205	ENST00000527920	CSF1R	P07333	972 aa		41.97	■■■■■ 4.31
SSSCA1-205	ENST00000527920	CIAPIN1	Q6FI81	312 aa		41.97	■■■■■ 4.31
SSSCA1-205	ENST00000527920	BSDC1	Q9NW68	430 aa	Predicted RBP	41.97	■■■■■ 4.31
SSSCA1-205	ENST00000527920	ANKIB1	Q9P2G1	1089 aa		41.97	■■■■■ 4.31
SSSCA1-205	ENST00000527920	ADAMTSL1	Q8N6G6	1762 aa		41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	TNIP1	Q15025	636 aa		41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	MRPL50	Q8N5N7	158 aa	Known RBP	41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	DNAJC5G	Q8N7S2	189 aa		41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	CDCA7L	Q96GN5	454 aa		41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	GGA1	Q9UJY5	639 aa		41.96	■■■■■ 4.31
SSSCA1-205	ENST00000527920	XDH	P47989	1333 aa		41.95	■■■■■ 4.31
SSSCA1-205	ENST00000527920	ALDH1L1	O75891	902 aa		41.95	■■■■■ 4.31
SSSCA1-205	ENST00000527920	EAPP	Q56P03	285 aa	Predicted RBP	41.95	■■■■■ 4.31
SSSCA1-205	ENST00000527920	DIEXF	Q68CQ4	756 aa	Known RBP	41.95	■■■■■ 4.31
SSSCA1-205	ENST00000527920	YDJC	A8MPS7	323 aa		41.94	■■■■■ 4.3
SSSCA1-205	ENST00000527920	UFL1	O94874	794 aa		41.93	■■■■■ 4.3

Retrieved 100 of 20,778 RNA–protein pairs in 203 ms