RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
ATM-212ENST00000527805 BAG6P46379 1132 aa17.52■□□□□ 0.4
ATM-212ENST00000527805 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.4
ATM-212ENST00000527805 RICTORQ6R327 1708 aa17.52■□□□□ 0.4
ATM-212ENST00000527805 RNF41Q9H4P4 317 aaPredicted RBP17.52■□□□□ 0.4
ATM-212ENST00000527805 TECPR2O15040 1411 aa17.52■□□□□ 0.39
ATM-212ENST00000527805 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.39
ATM-212ENST00000527805 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.39
ATM-212ENST00000527805 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.39
ATM-212ENST00000527805 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
ATM-212ENST00000527805 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
ATM-212ENST00000527805 KCNQ4P56696 695 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
ATM-212ENST00000527805 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 A0A1B0GUL7 405 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
ATM-212ENST00000527805 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
ATM-212ENST00000527805 ADGRB1O14514 1584 aa17.5■□□□□ 0.39
ATM-212ENST00000527805 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
ATM-212ENST00000527805 HOOK1Q9UJC3 728 aaKnown RBP17.5■□□□□ 0.39
ATM-212ENST00000527805 AFF2P51816 1311 aa17.5■□□□□ 0.39
ATM-212ENST00000527805 MED14O60244 1454 aa17.5■□□□□ 0.39
ATM-212ENST00000527805 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
ATM-212ENST00000527805 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
ATM-212ENST00000527805 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
ATM-212ENST00000527805 DBNDD2Q9BQY9 259 aa17.5■□□□□ 0.39
ATM-212ENST00000527805 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 STK38Q15208 465 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 NAA16Q6N069 864 aaPredicted RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 KDRP35968 1356 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 TNNI3KQ59H18 835 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
ATM-212ENST00000527805 FPGT-TNNI3KV9GXZ4 949 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 SLC4A8Q2Y0W8 1093 aa17.49■□□□□ 0.39
ATM-212ENST00000527805 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
ATM-212ENST00000527805 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
ATM-212ENST00000527805 CRNKL1Q9BZJ0 848 aaKnown RBP17.48■□□□□ 0.39
ATM-212ENST00000527805 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
ATM-212ENST00000527805 MAP3K15Q6ZN16 1313 aa17.48■□□□□ 0.39
ATM-212ENST00000527805 GSTO1P78417 241 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
ATM-212ENST00000527805 DIP2AQ14689 1571 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
ATM-212ENST00000527805 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 JAG2Q9Y219 1238 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 GSE1Q14687 1217 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
ATM-212ENST00000527805 HMG20BQ9P0W2 317 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
ATM-212ENST00000527805 HEG1Q9ULI3 1381 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 FER1L4A9Z1Z3 1794 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 TAF5LO75529 589 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
ATM-212ENST00000527805 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
ATM-212ENST00000527805 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 MFSD6Q6ZSS7 791 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
ATM-212ENST00000527805 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
ATM-212ENST00000527805 JCADQ9P266 1359 aa17.46■□□□□ 0.38
ATM-212ENST00000527805 CPS1P31327 1500 aa17.46■□□□□ 0.38
ATM-212ENST00000527805 SASS6Q6UVJ0 657 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 GIGYF2Q6Y7W6 1299 aaKnown RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 CTCFLQ8NI51 663 aaPredicted RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 CIZ1Q9ULV3 898 aaPredicted RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 RNF113AO15541 343 aaKnown RBP17.45■□□□□ 0.38
ATM-212ENST00000527805 KRT85P78386 507 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
ATM-212ENST00000527805 CCDC196A0A1B0GTZ2 297 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 UFL1O94874 794 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 PDE4BQ07343 736 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 NCOA7Q8NI08 942 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 EYA3Q99504 573 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 PCCAP05165 728 aaPredicted RBP17.44■□□□□ 0.38
ATM-212ENST00000527805 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
ATM-212ENST00000527805 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
ATM-212ENST00000527805 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms