RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RARAP10276 462 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 CD33P20138 364 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
SKP1-212ENST00000523966 GSX2Q9BZM3 304 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 MRS2Q9HD23 443 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 NLRP2Q9NX02 1062 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 NSFL1CQ9UNZ2 370 aaKnown RBP6.5□□□□□ -1.37
SKP1-212ENST00000523966 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.5□□□□□ -1.37
SKP1-212ENST00000523966 GPR25O00155 361 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 PSAPP07602 524 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 CES1P23141 567 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 ORC1Q13415 861 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 ENOX2Q16206 610 aaKnown RBP6.49□□□□□ -1.37
SKP1-212ENST00000523966 ZNF787Q6DD87 383 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 FBXO33Q7Z6M2 555 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 SLC16A10Q8TF71 515 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 BHMTQ93088 406 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 ZNF428Q96B54 188 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 ZFYVE28Q9HCC9 887 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
SKP1-212ENST00000523966 NXF1Q9UBU9 619 aaKnown RBP6.49□□□□□ -1.37
SKP1-212ENST00000523966 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
SKP1-212ENST00000523966 THBS1P07996 1170 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 BMP4P12644 408 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 NFKB1P19838 968 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 TARSP26639 723 aaKnown RBP6.48□□□□□ -1.37
SKP1-212ENST00000523966 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
SKP1-212ENST00000523966 FAM182BQ5T319 152 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 NPAS3Q8IXF0 933 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 FBF1Q8TES7 1133 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 NANOS1Q8WY41 292 aaKnown RBP6.48□□□□□ -1.37
SKP1-212ENST00000523966 MRRFQ96E11 262 aaKnown RBP6.48□□□□□ -1.37
SKP1-212ENST00000523966 FRMD6Q96NE9 622 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 NDFIP2Q9NV92 336 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 SPG7Q9UQ90 795 aa6.48□□□□□ -1.37
SKP1-212ENST00000523966 POTECB2RU33 542 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 IGHA2P01877 340 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 MX2P20592 715 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 GRNP28799 593 aaKnown RBP6.47□□□□□ -1.37
SKP1-212ENST00000523966 PSMD2Q13200 908 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 DUSP9Q99956 384 aaKnown RBP6.47□□□□□ -1.37
SKP1-212ENST00000523966 IGFLR1Q9H665 355 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 PPP4R2Q9NY27 417 aa6.47□□□□□ -1.37
SKP1-212ENST00000523966 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
SKP1-212ENST00000523966 CTBSQ01459 385 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 PLAURQ03405 335 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 HYAL2Q12891 473 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 PCSK7Q16549 785 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 C1orf127Q8N9H9 656 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 SPACA7Q96KW9 195 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 PARP2Q9UGN5 583 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 WWC3Q9ULE0 1092 aa6.46□□□□□ -1.38
SKP1-212ENST00000523966 MMP20O60882 483 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 EDN3P14138 238 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 VEGFBP49765 207 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 TAGLNQ01995 201 aaKnown RBP6.45□□□□□ -1.38
SKP1-212ENST00000523966 TBC1D8BQ0IIM8 1120 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 RAB44Q7Z6P3 723 aaPredicted RBP6.45□□□□□ -1.38
SKP1-212ENST00000523966 NCAPG2Q86XI2 1143 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 OR13H1Q8NG92 308 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 CCDC74AQ96AQ1 378 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 SLC30A3Q99726 388 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
SKP1-212ENST00000523966 RBSNQ9H1K0 784 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 TLR7Q9NYK1 1049 aaKnown RBP6.45□□□□□ -1.38
SKP1-212ENST00000523966 CNTN3Q9P232 1028 aa6.45□□□□□ -1.38
SKP1-212ENST00000523966 LCE2BO14633 110 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 GIPC1O14908 333 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 EREGO14944 169 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 SORBS3O60504 671 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 POLR3DP05423 398 aaPredicted RBP6.44□□□□□ -1.38
SKP1-212ENST00000523966 MAP2K3P46734 347 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 DHX32Q7L7V1 743 aaKnown RBP6.44□□□□□ -1.38
SKP1-212ENST00000523966 ZFATQ9P243 1243 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 VTI1BQ9UEU0 232 aa6.44□□□□□ -1.38
SKP1-212ENST00000523966 GNA15P30679 374 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 SOX18P35713 384 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 GRIN2CQ14957 1233 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
SKP1-212ENST00000523966 USPL1Q5W0Q7 1092 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 SYT9Q86SS6 491 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 GALNT12Q8IXK2 581 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 KANSL3Q9P2N6 904 aa6.43□□□□□ -1.38
SKP1-212ENST00000523966 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 H3BM21 787 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 SIN3BO75182 1162 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 GHRHP01286 108 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 CYP2E1P05181 493 aaPredicted RBP6.42□□□□□ -1.38
SKP1-212ENST00000523966 EIF4BP23588 611 aaKnown RBP6.42□□□□□ -1.38
SKP1-212ENST00000523966 NRLP54845 237 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 DAB2P98082 770 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 ZNF468Q5VIY5 522 aaPredicted RBP6.42□□□□□ -1.38
SKP1-212ENST00000523966 TMC4Q7Z404 712 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 EPS8L3Q8TE67 593 aaKnown RBP6.42□□□□□ -1.38
SKP1-212ENST00000523966 SETDB2Q96T68 719 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms