RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 COL4A5P29400 1685 aa23.15■■□□□ 1.3
VEGFA-222ENST00000520948 ISCA1Q9BUE6 129 aa23.14■■□□□ 1.29
VEGFA-222ENST00000520948 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-222ENST00000520948 CLEC11AQ9Y240 323 aa23.14■■□□□ 1.29
VEGFA-222ENST00000520948 FZD9O00144 591 aa23.13■■□□□ 1.29
VEGFA-222ENST00000520948 EPHX2P34913 555 aa23.13■■□□□ 1.29
VEGFA-222ENST00000520948 TRIM28Q13263 835 aaKnown RBP23.13■■□□□ 1.29
VEGFA-222ENST00000520948 SUSD4Q5VX71 490 aa23.13■■□□□ 1.29
VEGFA-222ENST00000520948 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
VEGFA-222ENST00000520948 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
VEGFA-222ENST00000520948 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
VEGFA-222ENST00000520948 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-222ENST00000520948 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
VEGFA-222ENST00000520948 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-222ENST00000520948 FKBP5Q13451 457 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-222ENST00000520948 PARP10Q53GL7 1025 aa23.11■■□□□ 1.29
VEGFA-222ENST00000520948 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
VEGFA-222ENST00000520948 PSMD1Q99460 953 aa23.11■■□□□ 1.29
VEGFA-222ENST00000520948 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
VEGFA-222ENST00000520948 NTSR2O95665 410 aa23.1■■□□□ 1.29
VEGFA-222ENST00000520948 C3orf67Q6ZVT6 689 aa23.1■■□□□ 1.29
VEGFA-222ENST00000520948 JDP2Q8WYK2 163 aa23.1■■□□□ 1.29
VEGFA-222ENST00000520948 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
VEGFA-222ENST00000520948 LTBP1Q14766 1721 aa23.1■■□□□ 1.29
VEGFA-222ENST00000520948 HOXA10P31260 410 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-222ENST00000520948 MAP1SQ66K74 1059 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-222ENST00000520948 GPC2Q8N158 579 aa23.09■■□□□ 1.29
VEGFA-222ENST00000520948 MYD88Q99836 296 aa23.09■■□□□ 1.29
VEGFA-222ENST00000520948 PTPRCP08575 1304 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 TMEM88BA6NKF7 163 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 PPEF1O14829 653 aaPredicted RBP23.08■■□□□ 1.29
VEGFA-222ENST00000520948 BCAR3O75815 825 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 CC2D2BQ6DHV5 1058 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 DNAAF4Q8WXU2 420 aa23.08■■□□□ 1.29
VEGFA-222ENST00000520948 F6X3S4 739 aa23.07■■□□□ 1.28
VEGFA-222ENST00000520948 IGKV5-2P06315 115 aa23.07■■□□□ 1.28
VEGFA-222ENST00000520948 EIF6P56537 245 aaKnown RBP23.07■■□□□ 1.28
VEGFA-222ENST00000520948 PPP1R42Q7Z4L9 355 aa23.07■■□□□ 1.28
VEGFA-222ENST00000520948 PNMA8AQ86V59 439 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-222ENST00000520948 RBM17Q96I25 401 aaKnown RBP23.07■■□□□ 1.28
VEGFA-222ENST00000520948 LARGE2Q8N3Y3 721 aa23.06■■□□□ 1.28
VEGFA-222ENST00000520948 NOB1Q9ULX3 412 aaKnown RBP23.06■■□□□ 1.28
VEGFA-222ENST00000520948 LAMB2P55268 1798 aa23.06■■□□□ 1.28
VEGFA-222ENST00000520948 FOXN1O15353 648 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 VEGFBP49765 207 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 CNTROBQ8N137 903 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 CCDC191Q8NCU4 936 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 ARHGAP45Q92619 1136 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 CRAMP1Q96RY5 1269 aa23.05■■□□□ 1.28
VEGFA-222ENST00000520948 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
VEGFA-222ENST00000520948 BEND3Q5T5X7 828 aa23.04■■□□□ 1.28
VEGFA-222ENST00000520948 NEXNQ0ZGT2 675 aa23.03■■□□□ 1.28
VEGFA-222ENST00000520948 SLC10A5Q5PT55 438 aa23.03■■□□□ 1.28
VEGFA-222ENST00000520948 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
VEGFA-222ENST00000520948 NEURL1BA8MQ27 555 aa23.02■■□□□ 1.28
VEGFA-222ENST00000520948 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-222ENST00000520948 CWF19L2Q2TBE0 894 aaKnown RBP23.02■■□□□ 1.28
VEGFA-222ENST00000520948 NLRP3Q96P20 1036 aa23.02■■□□□ 1.28
VEGFA-222ENST00000520948 KIF16BQ96L93 1317 aa23.02■■□□□ 1.28
VEGFA-222ENST00000520948 SCNN1DP51172 638 aa23.01■■□□□ 1.27
VEGFA-222ENST00000520948 GRIPAP1Q4V328 841 aa23.01■■□□□ 1.27
VEGFA-222ENST00000520948 NIM1KQ8IY84 436 aa23.01■■□□□ 1.27
VEGFA-222ENST00000520948 CWC25Q9NXE8 425 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-222ENST00000520948 TRMT112Q9UI30 125 aaKnown RBP23.01■■□□□ 1.27
VEGFA-222ENST00000520948 PPIP5K2O43314 1243 aa23■■□□□ 1.27
VEGFA-222ENST00000520948 EPS15P42566 896 aa23■■□□□ 1.27
VEGFA-222ENST00000520948 AOC3Q16853 763 aa23■■□□□ 1.27
VEGFA-222ENST00000520948 ABCC4O15439 1325 aa23■■□□□ 1.27
VEGFA-222ENST00000520948 PCCAP05165 728 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-222ENST00000520948 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.27
VEGFA-222ENST00000520948 GCKRQ14397 625 aa22.99■■□□□ 1.27
VEGFA-222ENST00000520948 ZBTB38Q8NAP3 1195 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-222ENST00000520948 AIDAQ96BJ3 306 aa22.99■■□□□ 1.27
VEGFA-222ENST00000520948 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
VEGFA-222ENST00000520948 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
VEGFA-222ENST00000520948 ABT1Q9ULW3 272 aaKnown RBP22.99■■□□□ 1.27
VEGFA-222ENST00000520948 ATP6V0A2Q9Y487 856 aa22.99■■□□□ 1.27
VEGFA-222ENST00000520948 TAF1P21675 1872 aa22.98■■□□□ 1.27
VEGFA-222ENST00000520948 H7C1W4 665 aa22.98■■□□□ 1.27
VEGFA-222ENST00000520948 ALDH1L1O75891 902 aa22.98■■□□□ 1.27
VEGFA-222ENST00000520948 FAM89AQ96GI7 184 aa22.98■■□□□ 1.27
VEGFA-222ENST00000520948 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-222ENST00000520948 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
VEGFA-222ENST00000520948 RASSF10A6NK89 507 aa22.97■■□□□ 1.27
VEGFA-222ENST00000520948 IPO8O15397 1037 aaKnown RBP22.97■■□□□ 1.27
VEGFA-222ENST00000520948 HCLS1P14317 486 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-222ENST00000520948 DEFB115Q30KQ5 88 aa22.97■■□□□ 1.27
VEGFA-222ENST00000520948 SLC4A10Q6U841 1118 aa22.97■■□□□ 1.27
VEGFA-222ENST00000520948 DDX60Q8IY21 1712 aaKnown RBP22.96■■□□□ 1.27
VEGFA-222ENST00000520948 TRIM27P14373 513 aa22.96■■□□□ 1.27
VEGFA-222ENST00000520948 ATF7IPQ6VMQ6 1270 aa22.96■■□□□ 1.27
VEGFA-222ENST00000520948 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
VEGFA-222ENST00000520948 CTCFP49711 727 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-222ENST00000520948 CASP7P55210 303 aa22.95■■□□□ 1.26
VEGFA-222ENST00000520948 FRAT1Q92837 279 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-222ENST00000520948 TRPM7Q96QT4 1865 aa22.95■■□□□ 1.26
VEGFA-222ENST00000520948 TNNQ9UQP3 1299 aa22.95■■□□□ 1.26
VEGFA-222ENST00000520948 CDHR2Q9BYE9 1310 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms