RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 PCDHGC4Q9Y5F7 938 aa7.83□□□□□ -1.16
LINC01339-203ENST00000519336 H7C1W4 665 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 SCAMP3O14828 347 aaKnown RBP7.82□□□□□ -1.16
LINC01339-203ENST00000519336 EREGO14944 169 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 GADD45BO75293 160 aaPredicted RBP7.82□□□□□ -1.16
LINC01339-203ENST00000519336 CES1P23141 567 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 LAPTM4AQ15012 233 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 C1orf127Q8N9H9 656 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 PNMA5Q96PV4 448 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 CNTN3Q9P232 1028 aa7.82□□□□□ -1.16
LINC01339-203ENST00000519336 EIF4BP23588 611 aaKnown RBP7.81□□□□□ -1.16
LINC01339-203ENST00000519336 CCINQ13939 588 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 LBRQ14739 615 aaKnown RBP7.81□□□□□ -1.16
LINC01339-203ENST00000519336 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 FRMD6Q96NE9 622 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 NPHS2Q9NP85 383 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 AK5Q9Y6K8 562 aa7.81□□□□□ -1.16
LINC01339-203ENST00000519336 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
LINC01339-203ENST00000519336 FAM157BP0CG42 384 aa7.8□□□□□ -1.16
LINC01339-203ENST00000519336 RARAP10276 462 aa7.8□□□□□ -1.16
LINC01339-203ENST00000519336 TARSP26639 723 aaKnown RBP7.8□□□□□ -1.16
LINC01339-203ENST00000519336 ERCC5P28715 1186 aaPredicted RBP7.8□□□□□ -1.16
LINC01339-203ENST00000519336 DBN1Q16643 649 aa7.8□□□□□ -1.16
LINC01339-203ENST00000519336 KANSL3Q9P2N6 904 aa7.8□□□□□ -1.16
LINC01339-203ENST00000519336 EGFRP00533 1210 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 MAPTP10636 758 aaKnown RBP7.79□□□□□ -1.16
LINC01339-203ENST00000519336 HDLBPQ00341 1268 aaKnown RBP7.79□□□□□ -1.16
LINC01339-203ENST00000519336 PMEPA1Q969W9 287 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 KIFC2Q96AC6 838 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 CHRDQ9H2X0 955 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
LINC01339-203ENST00000519336 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
LINC01339-203ENST00000519336 PHF20L1A8MW92 1017 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 BNIP3LO60238 219 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
LINC01339-203ENST00000519336 THBS1P07996 1170 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 NFKB1P19838 968 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 CD33P20138 364 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 KCNQ4P56696 695 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 TNP2Q05952 138 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 GRIN2CQ14957 1233 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
LINC01339-203ENST00000519336 TRIM22Q8IYM9 498 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 BHMTQ93088 406 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
LINC01339-203ENST00000519336 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
LINC01339-203ENST00000519336 CDC14CA4D256 554 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 EFSO43281 561 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 MMP20O60882 483 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 IGSF3O75054 1194 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 ZNF76P36508 570 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 LDLRAD1Q5T700 205 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 NXPE4Q6UWF7 544 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 RNF34Q969K3 372 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 CRELD1Q96HD1 420 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 OSBPL7Q9BZF2 842 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 C11orf16Q9NQ32 467 aa7.77□□□□□ -1.17
LINC01339-203ENST00000519336 GMPR2Q9P2T1 348 aaKnown RBP7.77□□□□□ -1.17
LINC01339-203ENST00000519336 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
LINC01339-203ENST00000519336 GIPC1O14908 333 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 ITGA6P23229 1130 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 IRX2Q9BZI1 471 aaPredicted RBP7.76□□□□□ -1.17
LINC01339-203ENST00000519336 EHD4Q9H223 541 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 ZFATQ9P243 1243 aa7.76□□□□□ -1.17
LINC01339-203ENST00000519336 PSAPP07602 524 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 CTSHP09668 335 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 LAMC2Q13753 1193 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 UBAP2LQ14157 1087 aaKnown RBP7.75□□□□□ -1.17
LINC01339-203ENST00000519336 NCAPG2Q86XI2 1143 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 NT5DC4Q86YG4 428 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 ZNF837Q96EG3 531 aaPredicted RBP7.75□□□□□ -1.17
LINC01339-203ENST00000519336 TRIM47Q96LD4 638 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 IGFLR1Q9H665 355 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 PPP4R2Q9NY27 417 aa7.75□□□□□ -1.17
LINC01339-203ENST00000519336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.75□□□□□ -1.17
LINC01339-203ENST00000519336 GPR25O00155 361 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 USP17L7P0C7H9 530 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 EDN3P14138 238 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 SNRPBP14678 240 aaKnown RBP7.74□□□□□ -1.17
LINC01339-203ENST00000519336 FANCCQ00597 558 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 TBC1D8BQ0IIM8 1120 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 FOXR1Q6PIV2 292 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 SLC30A3Q99726 388 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 FAM8A1Q9UBU6 413 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 ATXN7L1Q9ULK2 861 aaPredicted RBP7.74□□□□□ -1.17
LINC01339-203ENST00000519336 PHF24Q9UPV7 400 aa7.74□□□□□ -1.17
LINC01339-203ENST00000519336 ZC3H6P61129 1189 aaKnown RBP7.73□□□□□ -1.17
LINC01339-203ENST00000519336 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
LINC01339-203ENST00000519336 GRM2Q14416 872 aa7.73□□□□□ -1.17
LINC01339-203ENST00000519336 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms