RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 CHD4Q14839 1912 aa8.17□□□□□ -1.1
HMBOX1-206ENST00000519047 TNRC6CQ9HCJ0 1690 aaKnown RBP8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 TAF1P21675 1872 aa8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 YBX3P16989 372 aaKnown RBP eCLIP8.16□□□□□ -1.13e-9■■■□□ 15.5
HMBOX1-206ENST00000519047 GCKRQ14397 625 aa8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 ZBTB38Q8NAP3 1195 aaPredicted RBP8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
HMBOX1-206ENST00000519047 H7C1W4 665 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 BCAR3O75815 825 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 HCLS1P14317 486 aaPredicted RBP8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 HOXA10P31260 410 aaPredicted RBP8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 STYK1Q6J9G0 422 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 TTLL6Q8N841 843 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 ARHGAP45Q92619 1136 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 MASTLQ96GX5 879 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 NLRP3Q96P20 1036 aa8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 NOB1Q9ULX3 412 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-206ENST00000519047 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 NPR1P16066 1061 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 CASP7P55210 303 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 SF3B3Q15393 1217 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 GPR162Q16538 588 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 SBF1O95248 1867 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 CCDC88AQ3V6T2 1871 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 CDHR2Q9BYE9 1310 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 FER1L6Q2WGJ9 1857 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 ALDH1B1P30837 517 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 SLC4A10Q6U841 1118 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.111e-7■■□□□ 13.2
HMBOX1-206ENST00000519047 CRAMP1Q96RY5 1269 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
HMBOX1-206ENST00000519047 IPO8O15397 1037 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 PDE8AO60658 829 aa8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 HSP90B1P14625 803 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 PLA2G12BQ9BX93 195 aa8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 API5Q9BZZ5 524 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 WWC3Q9ULE0 1092 aa8.13□□□□□ -1.11
HMBOX1-206ENST00000519047 UTYO14607 1347 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 GRM8O00222 908 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 TRIM27P14373 513 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 PRPF40BQ6NWY9 871 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 USP44Q9H0E7 712 aa8.12□□□□□ -1.11
HMBOX1-206ENST00000519047 CSF1RP07333 972 aa8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 NBPF7P0C2Y1 421 aaPredicted RBP8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 CCT4P50991 539 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 TTLL11Q8NHH1 800 aa8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 ABCC4O15439 1325 aa8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 DICER1Q9UPY3 1922 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-206ENST00000519047 C21orf2O43822 256 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 BBOX1O75936 387 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 CTSWP56202 376 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 FOXO4P98177 505 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 ZKSCAN2Q63HK3 967 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 KAZALD1Q96I82 304 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 TNNQ9UQP3 1299 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 SNED1Q8TER0 1413 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 COL4A1P02462 1669 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 STK25O00506 426 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 PYGBP11216 843 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 CCDC152Q4G0S7 254 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 CHADLQ6NUI6 762 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 FARP1Q9Y4F1 1045 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-206ENST00000519047 LRRC37AA6NMS7 1700 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 NFKBIEO00221 500 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 GRAPQ13588 217 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 EPHA10Q5JZY3 1008 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 SOGA3Q5TF21 947 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 OLFM4Q6UX06 510 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 SP8Q8IXZ3 490 aa8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
HMBOX1-206ENST00000519047 CELF1Q92879 486 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms