RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 HELLSQ9NRZ9 838 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 MIS18AQ9NYP9 233 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CALCOCO1Q9P1Z2 691 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 RBM27Q9P2N5 1060 aaKnown RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CLIP2Q9UDT6 1046 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CEP131Q9UPN4 1083 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CNPY2Q9Y2B0 182 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 AMOTL2Q9Y2J4 779 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 CHMP3Q9Y3E7 222 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 SNX14Q9Y5W7 946 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 V9GYY5 206 aaPredicted RBP2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ABCC3O15438 1527 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ARHGEF40Q8TER5 1519 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 PREX1Q8TCU6 1659 aa2.41□□□□□ -2.02
RNU1-40P-201ENST00000516816 ADGRB1O14514 1584 aa2.4□□□□□ -2.02
RNU1-40P-201ENST00000516816 CDC42BPGQ6DT37 1551 aa2.4□□□□□ -2.02
RNU1-40P-201ENST00000516816 KAT6BQ8WYB5 2073 aa2.4□□□□□ -2.02
RNU1-40P-201ENST00000516816 MAP3K5Q99683 1374 aa2.4□□□□□ -2.02
RNU1-40P-201ENST00000516816 TMEM131LA2VDJ0 1609 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 PIK3C2BO00750 1634 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC196A0A1B0GTZ2 297 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 A6NNZ2 444 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 PATL2C9JE40 543 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 POTEB2H3BUK9 544 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GRM8O00222 908 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF213O14771 459 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TBC1D12O60347 775 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 EIF3JO75822 258 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLU7O95391 586 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 SERPINC1P01008 464 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 APPP05067 770 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 SKILP12757 684 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 HCLS1P14317 486 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ATP5JP18859 108 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 RPS6KB1P23443 525 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GTF2F1P35269 517 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 PSEN1P49768 467 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CBX1P83916 185 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 DNM1Q05193 864 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TYRO3Q06418 890 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GABPB1Q06547 395 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 AIMP1Q12904 312 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 SART3Q15020 963 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 PPP2R5BQ15173 497 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 STK38Q15208 465 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTF1Q15361 905 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TUBB8Q3ZCM7 444 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANO6Q4KMQ2 910 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 HSP90B2PQ58FF3 399 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CT47A1Q5JQC4 288 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CREB3L3Q68CJ9 461 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ADALQ6DHV7 355 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 NAA16Q6N069 864 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GIMAP6Q6P9H5 292 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMCO3Q6UWJ1 677 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 DHX32Q7L7V1 743 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC186Q7Z3E2 898 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 BRAPQ7Z569 592 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANKLE2Q86XL3 938 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCAR1Q8IX12 1150 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 DHX37Q8IY37 1157 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT222Q8N1A0 295 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TXLNBQ8N3L3 684 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRI1Q8N9T8 703 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC150Q8NCX0 1101 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIAA1524Q8TCG1 905 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNG4Q8TDN1 519 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 IP6K1Q92551 441 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 UBXN4Q92575 508 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 SMARCE1Q969G3 411 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC47Q96A33 483 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF274Q96GC6 653 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 MRFAP1L1Q96HT8 127 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 AK7Q96M32 723 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE1Q96RT6 745 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 EYA1Q99502 592 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GBP3Q9H0R5 595 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 PHAXQ9H814 394 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 DDX21Q9NR30 783 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CREBZFQ9NS37 354 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 ATG3Q9NT62 314 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 CEP126Q9P2H0 1117 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TFIP11Q9UBB9 837 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 TBC1D2BQ9UPU7 963 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAP3K2Q9Y2U5 619 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 RBM8AQ9Y5S9 174 aaKnown RBP2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 NEXMIFQ5QGS0 1516 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 AKAP12Q02952 1782 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 RGS12O14924 1447 aa2.4□□□□□ -2.03
RNU1-40P-201ENST00000516816 A2ML1A8K2U0 1454 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NLRP1Q9C000 1473 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PLEKHG1Q9ULL1 1385 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TULP4Q9NRJ4 1543 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PNMA6EA0A0J9YXQ4 647 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A0U1RQG5 324 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUTM2FA1L443 756 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PSDA5PKW4 1024 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC27A2O14975 620 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms