RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
ABCC3-216ENST00000515585 SMIM5Q71RC9 77 aa17.05■□□□□ 0.32
ABCC3-216ENST00000515585 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
ABCC3-216ENST00000515585 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
ABCC3-216ENST00000515585 ARXQ96QS3 562 aa17.05■□□□□ 0.32
ABCC3-216ENST00000515585 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
ABCC3-216ENST00000515585 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
ABCC3-216ENST00000515585 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 PDE8AO60658 829 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 PDE1AP54750 535 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 TTC22Q5TAA0 569 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 SRP68Q9UHB9 627 aaKnown RBP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 NIP7Q9Y221 180 aaKnown RBP eCLIP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 SPEF2Q9C093 1822 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
ABCC3-216ENST00000515585 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
ABCC3-216ENST00000515585 CIAO1O76071 339 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 CTSWP56202 376 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
ABCC3-216ENST00000515585 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 COL4A1P02462 1669 aa17.03■□□□□ 0.32
ABCC3-216ENST00000515585 APBB1O00213 710 aa17.02■□□□□ 0.32
ABCC3-216ENST00000515585 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
ABCC3-216ENST00000515585 GPR162Q16538 588 aa17.02■□□□□ 0.32
ABCC3-216ENST00000515585 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
ABCC3-216ENST00000515585 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
ABCC3-216ENST00000515585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
ABCC3-216ENST00000515585 MX1P20591 662 aa17.01■□□□□ 0.31
ABCC3-216ENST00000515585 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCC3-216ENST00000515585 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
ABCC3-216ENST00000515585 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
ABCC3-216ENST00000515585 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
ABCC3-216ENST00000515585 EYA2O00167 538 aa17■□□□□ 0.31
ABCC3-216ENST00000515585 ZPR1O75312 459 aa17■□□□□ 0.31
ABCC3-216ENST00000515585 TAF1P21675 1872 aa17■□□□□ 0.31
ABCC3-216ENST00000515585 GPR108Q9NPR9 543 aa17■□□□□ 0.31
ABCC3-216ENST00000515585 ABCC12Q96J65 1359 aa17■□□□□ 0.31
ABCC3-216ENST00000515585 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
ABCC3-216ENST00000515585 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
ABCC3-216ENST00000515585 GREM2Q9H772 168 aa16.99■□□□□ 0.31
ABCC3-216ENST00000515585 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
ABCC3-216ENST00000515585 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
ABCC3-216ENST00000515585 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 ZNF609O15014 1411 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 GYS1P13807 737 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
ABCC3-216ENST00000515585 RFC4P35249 363 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
ABCC3-216ENST00000515585 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
ABCC3-216ENST00000515585 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
ABCC3-216ENST00000515585 SIL1Q9H173 461 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
ABCC3-216ENST00000515585 TM4SF1P30408 202 aa16.97■□□□□ 0.31
ABCC3-216ENST00000515585 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
ABCC3-216ENST00000515585 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
ABCC3-216ENST00000515585 PHF14O94880 888 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
ABCC3-216ENST00000515585 ITGA6P23229 1130 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.31
ABCC3-216ENST00000515585 NFIXQ14938 502 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
ABCC3-216ENST00000515585 SETDB2Q96T68 719 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.31
ABCC3-216ENST00000515585 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
ABCC3-216ENST00000515585 TFCP2Q12800 502 aa16.95■□□□□ 0.3
ABCC3-216ENST00000515585 LRRC24Q50LG9 513 aa16.95■□□□□ 0.3
ABCC3-216ENST00000515585 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
ABCC3-216ENST00000515585 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
ABCC3-216ENST00000515585 AKAP11Q9UKA4 1901 aa16.95■□□□□ 0.3
ABCC3-216ENST00000515585 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 SEC24BO95487 1268 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 SDSP20132 328 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 C3orf67Q6ZVT6 689 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
ABCC3-216ENST00000515585 AACSQ86V21 672 aa16.93■□□□□ 0.3
ABCC3-216ENST00000515585 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
ABCC3-216ENST00000515585 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
ABCC3-216ENST00000515585 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
ABCC3-216ENST00000515585 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
ABCC3-216ENST00000515585 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
ABCC3-216ENST00000515585 CHD4Q14839 1912 aa16.93■□□□□ 0.3
ABCC3-216ENST00000515585 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
ABCC3-216ENST00000515585 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms