RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 KCNQ4P56696 695 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 NLGN2Q8NFZ4 835 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 USP26Q9BXU7 913 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
SNF8-214ENST00000515174 UTRNP46939 3433 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 OS9Q13438 667 aaPredicted RBP12.48□□□□□ -0.41
SNF8-214ENST00000515174 ZBTB38Q8NAP3 1195 aaPredicted RBP12.48□□□□□ -0.41
SNF8-214ENST00000515174 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 IL17RAQ96F46 866 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 AK7Q96M32 723 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 ZBTB3Q9H5J0 574 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 ECHDC1Q9NTX5 307 aa12.48□□□□□ -0.41
SNF8-214ENST00000515174 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
SNF8-214ENST00000515174 CIAO1O76071 339 aa12.47□□□□□ -0.41
SNF8-214ENST00000515174 CSF1RP07333 972 aa12.47□□□□□ -0.41
SNF8-214ENST00000515174 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
SNF8-214ENST00000515174 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
SNF8-214ENST00000515174 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
SNF8-214ENST00000515174 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
SNF8-214ENST00000515174 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
SNF8-214ENST00000515174 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
SNF8-214ENST00000515174 CHMLP26374 656 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
SNF8-214ENST00000515174 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 NLRP10Q86W26 655 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 CNTROBQ8N137 903 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 KIF2CQ99661 725 aa12.46□□□□□ -0.41
SNF8-214ENST00000515174 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
SNF8-214ENST00000515174 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
SNF8-214ENST00000515174 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNF8-214ENST00000515174 IL15P40933 162 aaPredicted RBP12.45□□□□□ -0.42
SNF8-214ENST00000515174 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
SNF8-214ENST00000515174 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
SNF8-214ENST00000515174 ZNF526Q8TF50 670 aaPredicted RBP12.45□□□□□ -0.42
SNF8-214ENST00000515174 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
SNF8-214ENST00000515174 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
SNF8-214ENST00000515174 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
SNF8-214ENST00000515174 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
SNF8-214ENST00000515174 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
SNF8-214ENST00000515174 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
SNF8-214ENST00000515174 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
SNF8-214ENST00000515174 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
SNF8-214ENST00000515174 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
SNF8-214ENST00000515174 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 EYA2O00167 538 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 HIP1O00291 1037 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 HSP90B1P14625 803 aaKnown RBP12.43□□□□□ -0.42
SNF8-214ENST00000515174 ATP5JP18859 108 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 ANAPC15P60006 121 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 HLFQ16534 295 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 PARP10Q53GL7 1025 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 AACSQ86V21 672 aa12.43□□□□□ -0.42
SNF8-214ENST00000515174 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
SNF8-214ENST00000515174 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
SNF8-214ENST00000515174 RABEP1Q15276 862 aa12.42□□□□□ -0.42
SNF8-214ENST00000515174 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
SNF8-214ENST00000515174 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
SNF8-214ENST00000515174 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
SNF8-214ENST00000515174 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
SNF8-214ENST00000515174 PDE8AO60658 829 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 CAMTA2O94983 1202 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 HSPA6P17066 643 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 RUFY2Q8WXA3 655 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 JARID2Q92833 1246 aaPredicted RBP12.41□□□□□ -0.42
SNF8-214ENST00000515174 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
SNF8-214ENST00000515174 GNPATO15228 680 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 SGSM2O43147 1006 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 TFCP2Q12800 502 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
SNF8-214ENST00000515174 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNF8-214ENST00000515174 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
SNF8-214ENST00000515174 MCCP23508 829 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 SIL1Q9H173 461 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
SNF8-214ENST00000515174 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 AKAP2Q9Y2D5 859 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
SNF8-214ENST00000515174 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
SNF8-214ENST00000515174 NRXN2Q9P2S2 1712 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
SNF8-214ENST00000515174 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 CTSWP56202 376 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms