RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.52
SNF8-212ENST00000514089 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
SNF8-212ENST00000514089 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
SNF8-212ENST00000514089 TMC4Q7Z404 712 aa18.26■□□□□ 0.51
SNF8-212ENST00000514089 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
SNF8-212ENST00000514089 NUP98P52948 1817 aa18.26■□□□□ 0.51
SNF8-212ENST00000514089 ANKRD18BA2A2Z9 1011 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
SNF8-212ENST00000514089 CASP7P55210 303 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
SNF8-212ENST00000514089 CCDC57Q2TAC2 916 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 GRIPAP1Q4V328 841 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
SNF8-212ENST00000514089 LMBR1LQ6UX01 489 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 GREM2Q9H772 168 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 SEC31BQ9NQW1 1179 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
SNF8-212ENST00000514089 GNAI3P08754 354 aa18.24■□□□□ 0.51
SNF8-212ENST00000514089 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
SNF8-212ENST00000514089 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
SNF8-212ENST00000514089 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
SNF8-212ENST00000514089 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
SNF8-212ENST00000514089 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
SNF8-212ENST00000514089 ITGA6P23229 1130 aa18.23■□□□□ 0.51
SNF8-212ENST00000514089 YY1P25490 414 aa18.23■□□□□ 0.51
SNF8-212ENST00000514089 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
SNF8-212ENST00000514089 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
SNF8-212ENST00000514089 TMEM57Q8N5G2 664 aa18.23■□□□□ 0.51
SNF8-212ENST00000514089 C7orf43Q8WVR3 580 aa18.23■□□□□ 0.51
SNF8-212ENST00000514089 AFDNP55196 1824 aaKnown RBP18.22■□□□□ 0.51
SNF8-212ENST00000514089 PLIN1O60240 522 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 CSF1RP07333 972 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 FOXO4P98177 505 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 MPNDQ8N594 471 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
SNF8-212ENST00000514089 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
SNF8-212ENST00000514089 LMNB1P20700 586 aa18.21■□□□□ 0.51
SNF8-212ENST00000514089 RASSF7Q02833 373 aa18.21■□□□□ 0.51
SNF8-212ENST00000514089 C9orf131Q5VYM1 1079 aa18.21■□□□□ 0.51
SNF8-212ENST00000514089 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
SNF8-212ENST00000514089 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
SNF8-212ENST00000514089 UTYO14607 1347 aa18.21■□□□□ 0.51
SNF8-212ENST00000514089 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNF8-212ENST00000514089 EPHA10Q5JZY3 1008 aa18.2■□□□□ 0.5
SNF8-212ENST00000514089 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
SNF8-212ENST00000514089 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
SNF8-212ENST00000514089 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
SNF8-212ENST00000514089 MEIS3Q99687 375 aa18.19■□□□□ 0.5
SNF8-212ENST00000514089 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
SNF8-212ENST00000514089 NFKBIEO00221 500 aa18.18■□□□□ 0.5
SNF8-212ENST00000514089 GNAI2P04899 355 aa18.18■□□□□ 0.5
SNF8-212ENST00000514089 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
SNF8-212ENST00000514089 CNNM1Q9NRU3 951 aa18.18■□□□□ 0.5
SNF8-212ENST00000514089 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
SNF8-212ENST00000514089 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
SNF8-212ENST00000514089 KIF13BQ9NQT8 1826 aa18.17■□□□□ 0.5
SNF8-212ENST00000514089 G3V3G9 751 aa18.17■□□□□ 0.5
SNF8-212ENST00000514089 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
SNF8-212ENST00000514089 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
SNF8-212ENST00000514089 JDP2Q8WYK2 163 aa18.17■□□□□ 0.5
SNF8-212ENST00000514089 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
SNF8-212ENST00000514089 KCNJ4P48050 445 aa18.16■□□□□ 0.5
SNF8-212ENST00000514089 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
SNF8-212ENST00000514089 PSMD1Q99460 953 aa18.16■□□□□ 0.5
SNF8-212ENST00000514089 RTL9Q8NET4 1388 aa18.16■□□□□ 0.5
SNF8-212ENST00000514089 RLBP1P12271 317 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 GPSM2P81274 684 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 ZNF594Q96JF6 807 aaPredicted RBP18.15■□□□□ 0.5
SNF8-212ENST00000514089 EYA3Q99504 573 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
SNF8-212ENST00000514089 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
SNF8-212ENST00000514089 PPIP5K2O43314 1243 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 UFL1O94874 794 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
SNF8-212ENST00000514089 PDE3AQ14432 1141 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 WASHC4Q2M389 1173 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
SNF8-212ENST00000514089 ZC3H12CQ9C0D7 883 aaKnown RBP18.14■□□□□ 0.49
SNF8-212ENST00000514089 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 LTBP3Q9NS15 1303 aa18.14■□□□□ 0.49
SNF8-212ENST00000514089 TNRC6CQ9HCJ0 1690 aaKnown RBP18.13■□□□□ 0.49
SNF8-212ENST00000514089 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 ATP2B4P23634 1241 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 ZNF526Q8TF50 670 aaPredicted RBP18.13■□□□□ 0.49
SNF8-212ENST00000514089 DDX19BQ9UMR2 479 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
SNF8-212ENST00000514089 CACNA1FO60840 1977 aa18.12■□□□□ 0.49
SNF8-212ENST00000514089 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
SNF8-212ENST00000514089 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms