RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 NEXNQ0ZGT2 675 aa14.86□□□□□ -0.03
SH3RF1-205ENST00000511421 CWF19L2Q2TBE0 894 aaKnown RBP14.86□□□□□ -0.03
SH3RF1-205ENST00000511421 DNAAF4Q8WXU2 420 aa14.86□□□□□ -0.03
SH3RF1-205ENST00000511421 PDE8AO60658 829 aa14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 MIER1Q8N108 512 aa14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 CELF1Q92879 486 aaKnown RBP14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 CDHR2Q9BYE9 1310 aa14.85□□□□□ -0.03
SH3RF1-205ENST00000511421 DDNO94850 711 aaPredicted RBP14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 CDCA7LQ96GN5 454 aa14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 RTFDC1Q9BY42 306 aaPredicted RBP14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 H7C1W4 665 aa14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 FZD9O00144 591 aa14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
SH3RF1-205ENST00000511421 TAF1P21675 1872 aa14.83□□□□□ -0.03
SH3RF1-205ENST00000511421 COL4A1P02462 1669 aa14.83□□□□□ -0.03
SH3RF1-205ENST00000511421 COL4A5P29400 1685 aa14.83□□□□□ -0.03
SH3RF1-205ENST00000511421 ZNF541Q9H0D2 1346 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 F6X3S4 739 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 GCKRQ14397 625 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 TRMT2AQ8IZ69 625 aaKnown RBP14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 MPNDQ8N594 471 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 LINS1Q8NG48 757 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 RBM46Q8TBY0 533 aaKnown RBP14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 WDR90Q96KV7 1748 aa14.83□□□□□ -0.04
SH3RF1-205ENST00000511421 RPS8P62241 208 aaKnown RBP14.82□□□□□ -0.04
SH3RF1-205ENST00000511421 CCDC152Q4G0S7 254 aa14.82□□□□□ -0.04
SH3RF1-205ENST00000511421 C16orf71Q8IYS4 520 aaPredicted RBP14.82□□□□□ -0.04
SH3RF1-205ENST00000511421 LARGE2Q8N3Y3 721 aa14.82□□□□□ -0.04
SH3RF1-205ENST00000511421 CASP7P55210 303 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 DPP8Q6V1X1 898 aaPredicted RBP14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 JDP2Q8WYK2 163 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 VPS33BQ9H267 617 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 CTSWP56202 376 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 AOC3Q16853 763 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 BEND3Q5T5X7 828 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 UBE3BQ7Z3V4 1068 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 MRPL50Q8N5N7 158 aaKnown RBP14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 SUPT20HQ8NEM7 779 aa14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 L3MBTL3Q96JM7 780 aaPredicted RBP14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 CCDC85AQ96PX6 553 aaPredicted RBP14.81□□□□□ -0.04
SH3RF1-205ENST00000511421 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
SH3RF1-205ENST00000511421 HSPA6P17066 643 aa14.8□□□□□ -0.04
SH3RF1-205ENST00000511421 TTLL11Q8NHH1 800 aa14.8□□□□□ -0.04
SH3RF1-205ENST00000511421 PLA2G12BQ9BX93 195 aa14.8□□□□□ -0.04
SH3RF1-205ENST00000511421 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
SH3RF1-205ENST00000511421 DUOX1Q9NRD9 1551 aa14.78□□□□□ -0.04
SH3RF1-205ENST00000511421 GPSM2P81274 684 aa14.78□□□□□ -0.04
SH3RF1-205ENST00000511421 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
SH3RF1-205ENST00000511421 FSTL1Q12841 308 aa14.78□□□□□ -0.04
SH3RF1-205ENST00000511421 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
SH3RF1-205ENST00000511421 EIF6P56537 245 aaKnown RBP14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 NIM1KQ8IY84 436 aa14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 GPC2Q8N158 579 aa14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 GREM2Q9H772 168 aa14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 POLLQ9UGP5 575 aa14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 NSFL1CQ9UNZ2 370 aaKnown RBP14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 RTL9Q8NET4 1388 aa14.77□□□□□ -0.04
SH3RF1-205ENST00000511421 CSF1RP07333 972 aa14.77□□□□□ -0.05
SH3RF1-205ENST00000511421 SMC1BQ8NDV3 1235 aa14.77□□□□□ -0.05
SH3RF1-205ENST00000511421 IQCA1LA6NCM1 817 aa14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 TAF1DQ9H5J8 278 aaPredicted RBP14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 PODXL2Q9NZ53 605 aa14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 ZNRF3Q9ULT6 936 aa14.76□□□□□ -0.05
SH3RF1-205ENST00000511421 ALDH1L1O75891 902 aa14.75□□□□□ -0.05
SH3RF1-205ENST00000511421 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
SH3RF1-205ENST00000511421 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
SH3RF1-205ENST00000511421 ALDH1L2Q3SY69 923 aa14.75□□□□□ -0.05
SH3RF1-205ENST00000511421 TBC1D16Q8TBP0 767 aa14.75□□□□□ -0.05
SH3RF1-205ENST00000511421 CT47B1P0C2W7 299 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 CXCL9Q07325 125 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 WASHC4Q2M389 1173 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 SLC4A10Q6U841 1118 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 SRCIN1Q9C0H9 1055 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 HACL1Q9UJ83 578 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 GJA3Q9Y6H8 435 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 PTPRCP08575 1304 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 YDJCA8MPS7 323 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 C6orf229H3BNL8 230 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 GRM8O00222 908 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 FOXO4P98177 505 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 BSDC1Q9NW68 430 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-205ENST00000511421 SCN4AP35499 1836 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 ITGA6P23229 1130 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 EPHX2P34913 555 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 SCNN1DP51172 638 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 ANKIB1Q9P2G1 1089 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 MYH3P11055 1940 aa14.73□□□□□ -0.05
SH3RF1-205ENST00000511421 CEP350Q5VT06 3117 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms