RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 MEIS3Q99687 375 aa16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 CACNA1SQ13698 1873 aa16.96■□□□□ 0.31
UBE2D3-221ENST00000507845 TAF1P21675 1872 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 PDE8AO60658 829 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 PDE6BP35913 854 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 POTEHQ6S545 545 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 PLA2G12BQ9BX93 195 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
UBE2D3-221ENST00000507845 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
UBE2D3-221ENST00000507845 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
UBE2D3-221ENST00000507845 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
UBE2D3-221ENST00000507845 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 GNAI3P08754 354 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 CHRNA5P30532 468 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 TGFB2P61812 414 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 EPHA10Q5JZY3 1008 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
UBE2D3-221ENST00000507845 SRGNP10124 158 aa16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 DPEP1P16444 411 aa16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 CTSWP56202 376 aa16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 FOXO4P98177 505 aa16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
UBE2D3-221ENST00000507845 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
UBE2D3-221ENST00000507845 H0YIN7 160 aa16.91■□□□□ 0.3
UBE2D3-221ENST00000507845 TTLL11Q8NHH1 800 aa16.91■□□□□ 0.3
UBE2D3-221ENST00000507845 SYT17Q9BSW7 474 aa16.91■□□□□ 0.3
UBE2D3-221ENST00000507845 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
UBE2D3-221ENST00000507845 CSF1RP07333 972 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 NPR1P16066 1061 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 KCNA3P22001 575 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 COL4A1P02462 1669 aa16.9■□□□□ 0.3
UBE2D3-221ENST00000507845 GNAI2P04899 355 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
UBE2D3-221ENST00000507845 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
UBE2D3-221ENST00000507845 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-221ENST00000507845 GREM2Q9H772 168 aa16.88■□□□□ 0.29
UBE2D3-221ENST00000507845 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
UBE2D3-221ENST00000507845 SSUH2Q9Y2M2 353 aa16.88■□□□□ 0.29
UBE2D3-221ENST00000507845 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
UBE2D3-221ENST00000507845 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-221ENST00000507845 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
UBE2D3-221ENST00000507845 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-221ENST00000507845 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
UBE2D3-221ENST00000507845 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
UBE2D3-221ENST00000507845 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
UBE2D3-221ENST00000507845 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 ITGA6P23229 1130 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 MTX1Q13505 466 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 GRAPQ13588 217 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
UBE2D3-221ENST00000507845 A0A1B0GUL6 1792 aa16.83■□□□□ 0.28
UBE2D3-221ENST00000507845 PRPF40BQ6NWY9 871 aaKnown RBP16.83■□□□□ 0.28
UBE2D3-221ENST00000507845 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
UBE2D3-221ENST00000507845 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
UBE2D3-221ENST00000507845 ANKRD18BA2A2Z9 1011 aa16.82■□□□□ 0.28
UBE2D3-221ENST00000507845 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-221ENST00000507845 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
UBE2D3-221ENST00000507845 DALRD3Q5D0E6 543 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-221ENST00000507845 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-221ENST00000507845 BBOX1O75936 387 aa16.81■□□□□ 0.28
UBE2D3-221ENST00000507845 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-221ENST00000507845 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
UBE2D3-221ENST00000507845 ATP8B2P98198 1209 aa16.81■□□□□ 0.28
UBE2D3-221ENST00000507845 CEP85Q6P2H3 762 aa16.81■□□□□ 0.28
UBE2D3-221ENST00000507845 PNMA6EA0A0J9YXQ4 647 aa16.8■□□□□ 0.28
UBE2D3-221ENST00000507845 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
UBE2D3-221ENST00000507845 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms