RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 USP50Q70EL3 339 aaPredicted RBP27.96■■■□□ 2.07
RNF4-205ENST00000504224 DBF4Q9UBU7 674 aaPredicted RBP27.96■■■□□ 2.07
RNF4-205ENST00000504224 CXCL9Q07325 125 aa27.95■■■□□ 2.06
RNF4-205ENST00000504224 RASSF10A6NK89 507 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 ATP5J2-PTCD1G3V325 749 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 DUSP27Q5VZP5 1158 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 CFAP44Q96MT7 982 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 GPRC5DQ9NZD1 345 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 LAMB2P55268 1798 aa27.94■■■□□ 2.06
RNF4-205ENST00000504224 FMR1Q06787 632 aaKnown RBP eCLIP27.93■■■□□ 2.06
RNF4-205ENST00000504224 FAM89AQ96GI7 184 aa27.93■■■□□ 2.06
RNF4-205ENST00000504224 ADARB2Q9NS39 739 aaKnown RBP27.93■■■□□ 2.06
RNF4-205ENST00000504224 HYPKQ9NX55 129 aa27.93■■■□□ 2.06
RNF4-205ENST00000504224 GMPSP49915 693 aaPredicted RBP27.92■■■□□ 2.06
RNF4-205ENST00000504224 KIAA2012Q0VF49 1180 aa27.92■■■□□ 2.06
RNF4-205ENST00000504224 RTL5Q5HYW3 569 aaPredicted RBP27.92■■■□□ 2.06
RNF4-205ENST00000504224 CIAPIN1Q6FI81 312 aa27.92■■■□□ 2.06
RNF4-205ENST00000504224 MBIPQ9NS73 344 aa27.92■■■□□ 2.06
RNF4-205ENST00000504224 RAD17O75943 681 aa27.91■■■□□ 2.06
RNF4-205ENST00000504224 PAXIP1Q6ZW49 1069 aaPredicted RBP27.91■■■□□ 2.06
RNF4-205ENST00000504224 ISCA1Q9BUE6 129 aa27.91■■■□□ 2.06
RNF4-205ENST00000504224 BCL2L13Q9BXK5 485 aa27.91■■■□□ 2.06
RNF4-205ENST00000504224 TRAF5O00463 557 aa27.9■■■□□ 2.06
RNF4-205ENST00000504224 CTCFP49711 727 aaPredicted RBP27.9■■■□□ 2.06
RNF4-205ENST00000504224 TMC4Q7Z404 712 aa27.9■■■□□ 2.06
RNF4-205ENST00000504224 PRKRIP1Q9H875 184 aaPredicted RBP27.9■■■□□ 2.06
RNF4-205ENST00000504224 TNIP1Q15025 636 aa27.89■■■□□ 2.06
RNF4-205ENST00000504224 WDR33Q9C0J8 1336 aaKnown RBP27.89■■■□□ 2.05
RNF4-205ENST00000504224 WBP1LQ9NX94 342 aa27.88■■■□□ 2.05
RNF4-205ENST00000504224 APAF1O14727 1248 aa27.87■■■□□ 2.05
RNF4-205ENST00000504224 GRM1Q13255 1194 aa27.87■■■□□ 2.05
RNF4-205ENST00000504224 RIC3Q7Z5B4 369 aa27.87■■■□□ 2.05
RNF4-205ENST00000504224 PRDM10Q9NQV6 1147 aa27.87■■■□□ 2.05
RNF4-205ENST00000504224 ELL2O00472 640 aaPredicted RBP27.86■■■□□ 2.05
RNF4-205ENST00000504224 SF3B3Q15393 1217 aaKnown RBP27.86■■■□□ 2.05
RNF4-205ENST00000504224 CELF1Q92879 486 aaKnown RBP27.86■■■□□ 2.05
RNF4-205ENST00000504224 NSFL1CQ9UNZ2 370 aaKnown RBP27.86■■■□□ 2.05
RNF4-205ENST00000504224 IRS4O14654 1257 aaPredicted RBP27.85■■■□□ 2.05
RNF4-205ENST00000504224 GOLGA2Q08379 1002 aa27.85■■■□□ 2.05
RNF4-205ENST00000504224 TAF1P21675 1872 aa27.85■■■□□ 2.05
RNF4-205ENST00000504224 LBX1P52954 281 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 GNAI1P63096 354 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 CALD1Q05682 793 aaKnown RBP27.84■■■□□ 2.05
RNF4-205ENST00000504224 WASHC4Q2M389 1173 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 CST9Q5W186 159 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 CAPNS2Q96L46 248 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 IFT57Q9NWB7 429 aa27.84■■■□□ 2.05
RNF4-205ENST00000504224 YDJCA8MPS7 323 aa27.83■■■□□ 2.05
RNF4-205ENST00000504224 C6orf229H3BNL8 230 aa27.83■■■□□ 2.05
RNF4-205ENST00000504224 RIMBP2O15034 1052 aa27.83■■■□□ 2.05
RNF4-205ENST00000504224 ZNF853P0CG23 659 aa27.83■■■□□ 2.05
RNF4-205ENST00000504224 MAP2K1Q02750 393 aaPredicted RBP27.83■■■□□ 2.05
RNF4-205ENST00000504224 CDHR2Q9BYE9 1310 aa27.83■■■□□ 2.05
RNF4-205ENST00000504224 DDX60Q8IY21 1712 aaKnown RBP27.83■■■□□ 2.05
RNF4-205ENST00000504224 ECE1P42892 770 aa27.82■■■□□ 2.04
RNF4-205ENST00000504224 TRIM28Q13263 835 aaKnown RBP27.82■■■□□ 2.04
RNF4-205ENST00000504224 CYP4F22Q6NT55 531 aa27.82■■■□□ 2.04
RNF4-205ENST00000504224 GLIS2Q9BZE0 524 aaPredicted RBP27.82■■■□□ 2.04
RNF4-205ENST00000504224 PHAXQ9H814 394 aaKnown RBP27.82■■■□□ 2.04
RNF4-205ENST00000504224 CNOT7Q9UIV1 285 aaKnown RBP27.82■■■□□ 2.04
RNF4-205ENST00000504224 DBNDD1Q9H9R9 158 aa27.81■■■□□ 2.04
RNF4-205ENST00000504224 DUOX1Q9NRD9 1551 aa27.81■■■□□ 2.04
RNF4-205ENST00000504224 H7C1D1 291 aa27.8■■■□□ 2.04
RNF4-205ENST00000504224 CELF2O95319 508 aaKnown RBP27.8■■■□□ 2.04
RNF4-205ENST00000504224 GPSM2P81274 684 aa27.8■■■□□ 2.04
RNF4-205ENST00000504224 TRPM4Q8TD43 1214 aa27.8■■■□□ 2.04
RNF4-205ENST00000504224 MYD88Q99836 296 aa27.8■■■□□ 2.04
RNF4-205ENST00000504224 TLL2Q9Y6L7 1015 aa27.8■■■□□ 2.04
RNF4-205ENST00000504224 SHTN1A0MZ66 631 aa27.79■■■□□ 2.04
RNF4-205ENST00000504224 HIRAP54198 1017 aaPredicted RBP27.79■■■□□ 2.04
RNF4-205ENST00000504224 ZNF408Q9H9D4 720 aa27.79■■■□□ 2.04
RNF4-205ENST00000504224 ZBTB12Q9Y330 459 aaPredicted RBP27.79■■■□□ 2.04
RNF4-205ENST00000504224 HSPA8P11142 646 aaKnown RBP27.78■■■□□ 2.04
RNF4-205ENST00000504224 RPS8P62241 208 aaKnown RBP27.78■■■□□ 2.04
RNF4-205ENST00000504224 MICALL2Q8IY33 904 aa27.78■■■□□ 2.04
RNF4-205ENST00000504224 ZBTB38Q8NAP3 1195 aaPredicted RBP27.78■■■□□ 2.04
RNF4-205ENST00000504224 GPR101Q96P66 508 aaPredicted RBP27.78■■■□□ 2.04
RNF4-205ENST00000504224 EYA3Q99504 573 aa27.78■■■□□ 2.04
RNF4-205ENST00000504224 POLLQ9UGP5 575 aa27.78■■■□□ 2.04
RNF4-205ENST00000504224 LRRC37AA6NMS7 1700 aa27.78■■■□□ 2.04
RNF4-205ENST00000504224 PSMD14O00487 310 aa27.77■■■□□ 2.04
RNF4-205ENST00000504224 HSP90B1P14625 803 aaKnown RBP27.77■■■□□ 2.04
RNF4-205ENST00000504224 ZC3H15Q8WU90 426 aaKnown RBP27.77■■■□□ 2.04
RNF4-205ENST00000504224 BEGAINQ9BUH8 593 aa27.77■■■□□ 2.04
RNF4-205ENST00000504224 DOK7Q18PE1 504 aa27.76■■■□□ 2.03
RNF4-205ENST00000504224 C8orf58Q8NAV2 365 aa27.76■■■□□ 2.03
RNF4-205ENST00000504224 PGAP2Q9UHJ9 254 aa27.76■■■□□ 2.03
RNF4-205ENST00000504224 TRPM7Q96QT4 1865 aa27.76■■■□□ 2.03
RNF4-205ENST00000504224 ECE2O60344 883 aa27.75■■■□□ 2.03
RNF4-205ENST00000504224 CDC37L1Q7L3B6 337 aa27.75■■■□□ 2.03
RNF4-205ENST00000504224 JARID2Q92833 1246 aaPredicted RBP27.75■■■□□ 2.03
RNF4-205ENST00000504224 SEC31BQ9NQW1 1179 aa27.75■■■□□ 2.03
RNF4-205ENST00000504224 COL4A1P02462 1669 aa27.75■■■□□ 2.03
RNF4-205ENST00000504224 CCDC30Q5VVM6 783 aa27.74■■■□□ 2.03
RNF4-205ENST00000504224 CCDC191Q8NCU4 936 aa27.74■■■□□ 2.03
RNF4-205ENST00000504224 TBC1D16Q8TBP0 767 aa27.74■■■□□ 2.03
RNF4-205ENST00000504224 G3V3G9 751 aa27.73■■■□□ 2.03
RNF4-205ENST00000504224 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
RNF4-205ENST00000504224 DCAF8Q5TAQ9 597 aa27.73■■■□□ 2.03
RNF4-205ENST00000504224 SAMD7Q7Z3H4 446 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms