RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TMC4Q7Z404 712 aa19.32■□□□□ 0.68
USP39-217ENST00000491659 JDP2Q8WYK2 163 aa19.32■□□□□ 0.68
USP39-217ENST00000491659 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
USP39-217ENST00000491659 FLIIQ13045 1269 aa19.31■□□□□ 0.68
USP39-217ENST00000491659 SP8Q8IXZ3 490 aa19.31■□□□□ 0.68
USP39-217ENST00000491659 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
USP39-217ENST00000491659 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
USP39-217ENST00000491659 FSTL1Q12841 308 aa19.3■□□□□ 0.68
USP39-217ENST00000491659 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
USP39-217ENST00000491659 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
USP39-217ENST00000491659 LARGE2Q8N3Y3 721 aa19.3■□□□□ 0.68
USP39-217ENST00000491659 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
USP39-217ENST00000491659 ZNF541Q9H0D2 1346 aa19.29■□□□□ 0.68
USP39-217ENST00000491659 DPP8Q6V1X1 898 aaPredicted RBP19.29■□□□□ 0.68
USP39-217ENST00000491659 SMC1BQ8NDV3 1235 aa19.29■□□□□ 0.68
USP39-217ENST00000491659 COL4A5P29400 1685 aa19.29■□□□□ 0.68
USP39-217ENST00000491659 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 IQCA1LA6NCM1 817 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 FZD9O00144 591 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 PPIP5K2O43314 1243 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 PDE8AO60658 829 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 MPNDQ8N594 471 aa19.28■□□□□ 0.68
USP39-217ENST00000491659 COL4A1P02462 1669 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 POTECB2RU33 542 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
USP39-217ENST00000491659 CWF19L2Q2TBE0 894 aaKnown RBP19.27■□□□□ 0.68
USP39-217ENST00000491659 CCDC152Q4G0S7 254 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 NIM1KQ8IY84 436 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 CELF1Q92879 486 aaKnown RBP19.27■□□□□ 0.68
USP39-217ENST00000491659 L3MBTL3Q96JM7 780 aaPredicted RBP19.27■□□□□ 0.68
USP39-217ENST00000491659 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
USP39-217ENST00000491659 DUOX1Q9NRD9 1551 aa19.27■□□□□ 0.67
USP39-217ENST00000491659 SPEF2Q9C093 1822 aa19.26■□□□□ 0.67
USP39-217ENST00000491659 NEURL1BA8MQ27 555 aa19.26■□□□□ 0.67
USP39-217ENST00000491659 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
USP39-217ENST00000491659 JARID2Q92833 1246 aaPredicted RBP19.26■□□□□ 0.67
USP39-217ENST00000491659 RTFDC1Q9BY42 306 aaPredicted RBP19.26■□□□□ 0.67
USP39-217ENST00000491659 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
USP39-217ENST00000491659 APLP1P51693 650 aa19.25■□□□□ 0.67
USP39-217ENST00000491659 AOC3Q16853 763 aa19.25■□□□□ 0.67
USP39-217ENST00000491659 GPC2Q8N158 579 aa19.25■□□□□ 0.67
USP39-217ENST00000491659 E9PSI1 815 aa19.24■□□□□ 0.67
USP39-217ENST00000491659 CTSWP56202 376 aa19.23■□□□□ 0.67
USP39-217ENST00000491659 RPS8P62241 208 aaKnown RBP19.23■□□□□ 0.67
USP39-217ENST00000491659 LINS1Q8NG48 757 aa19.23■□□□□ 0.67
USP39-217ENST00000491659 HACL1Q9UJ83 578 aa19.23■□□□□ 0.67
USP39-217ENST00000491659 GJA3Q9Y6H8 435 aa19.23■□□□□ 0.67
USP39-217ENST00000491659 KIAA2012Q0VF49 1180 aa19.22■□□□□ 0.67
USP39-217ENST00000491659 GCKRQ14397 625 aa19.22■□□□□ 0.67
USP39-217ENST00000491659 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
USP39-217ENST00000491659 CCDC85AQ96PX6 553 aaPredicted RBP19.22■□□□□ 0.67
USP39-217ENST00000491659 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
USP39-217ENST00000491659 NSFL1CQ9UNZ2 370 aaKnown RBP19.22■□□□□ 0.67
USP39-217ENST00000491659 ADAMTSL1Q8N6G6 1762 aa19.2■□□□□ 0.66
USP39-217ENST00000491659 H7C1W4 665 aa19.2■□□□□ 0.66
USP39-217ENST00000491659 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
USP39-217ENST00000491659 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
USP39-217ENST00000491659 TAF1DQ9H5J8 278 aaPredicted RBP19.2■□□□□ 0.66
USP39-217ENST00000491659 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
USP39-217ENST00000491659 F6X3S4 739 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 C6orf229H3BNL8 230 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 EPHX2P34913 555 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 GPSM2P81274 684 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 CHADLQ6NUI6 762 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 EYA3Q99504 573 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 RTL9Q8NET4 1388 aa19.19■□□□□ 0.66
USP39-217ENST00000491659 EAPPQ56P03 285 aaPredicted RBP19.18■□□□□ 0.66
USP39-217ENST00000491659 LDHDQ86WU2 507 aa19.18■□□□□ 0.66
USP39-217ENST00000491659 TTLL11Q8NHH1 800 aa19.18■□□□□ 0.66
USP39-217ENST00000491659 POTEIP0CG38 1075 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 POTEJP0CG39 1038 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 WASHC4Q2M389 1173 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
USP39-217ENST00000491659 PNMA8AQ86V59 439 aaPredicted RBP19.17■□□□□ 0.66
USP39-217ENST00000491659 PLA2G12BQ9BX93 195 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 GREM2Q9H772 168 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 ANKIB1Q9P2G1 1089 aa19.17■□□□□ 0.66
USP39-217ENST00000491659 BEND3Q5T5X7 828 aa19.16■□□□□ 0.66
USP39-217ENST00000491659 CIAPIN1Q6FI81 312 aa19.16■□□□□ 0.66
USP39-217ENST00000491659 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
USP39-217ENST00000491659 POLLQ9UGP5 575 aa19.16■□□□□ 0.66
USP39-217ENST00000491659 RIMBP2O15034 1052 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 UFL1O94874 794 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 SCNN1DP51172 638 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 CASP7P55210 303 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 CXCL9Q07325 125 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 SLC4A10Q6U841 1118 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 TBC1D16Q8TBP0 767 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 GGA1Q9UJY5 639 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 XDHP47989 1333 aa19.15■□□□□ 0.66
USP39-217ENST00000491659 TNIP1Q15025 636 aa19.14■□□□□ 0.65
USP39-217ENST00000491659 CDCA7LQ96GN5 454 aa19.14■□□□□ 0.65
USP39-217ENST00000491659 ALDH1L1O75891 902 aa19.13■□□□□ 0.65
USP39-217ENST00000491659 RAD17O75943 681 aa19.13■□□□□ 0.65
USP39-217ENST00000491659 IGHMBP2P38935 993 aaKnown RBP19.13■□□□□ 0.65
USP39-217ENST00000491659 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms