RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 APLP1P51693 650 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 MAP3K2Q9Y2U5 619 aa13.47□□□□□ -0.25
SCAMP4-208ENST00000489554 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-208ENST00000489554 LAMB2P55268 1798 aa13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 ZNF541Q9H0D2 1346 aa13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 DPP8Q6V1X1 898 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
SCAMP4-208ENST00000489554 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 NIM1KQ8IY84 436 aa13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 GPC2Q8N158 579 aa13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 MPNDQ8N594 471 aa13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 SSH1Q8WYL5 1049 aa13.44□□□□□ -0.26
SCAMP4-208ENST00000489554 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 PDE8AO60658 829 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 BCAR3O75815 825 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 FLIIQ13045 1269 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 G2E3Q7L622 706 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
SCAMP4-208ENST00000489554 IGKV5-2P06315 115 aa13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 AOC3Q16853 763 aa13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 CELF1Q92879 486 aaKnown RBP13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
SCAMP4-208ENST00000489554 COL4A5P29400 1685 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 CACNA1FO60840 1977 aa13.41□□□□□ -0.26
SCAMP4-208ENST00000489554 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 DNAAF4Q8WXU2 420 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 ZNRF3Q9ULT6 936 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 SCN4AP35499 1836 aa13.4□□□□□ -0.26
SCAMP4-208ENST00000489554 LMOD1P29536 600 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 EPHX2P34913 555 aa13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 CTSWP56202 376 aa13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 LINS1Q8NG48 757 aa13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-208ENST00000489554 H7C1W4 665 aa13.38□□□□□ -0.27
SCAMP4-208ENST00000489554 GCKRQ14397 625 aa13.38□□□□□ -0.27
SCAMP4-208ENST00000489554 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-208ENST00000489554 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
SCAMP4-208ENST00000489554 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-208ENST00000489554 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 GPSM2P81274 684 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 ANKRD18AQ8IVF6 992 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 DNAJC5GQ8N7S2 189 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 EYA3Q99504 573 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 TNNQ9UQP3 1299 aa13.37□□□□□ -0.27
SCAMP4-208ENST00000489554 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 PLIN1O60240 522 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 SCNN1DP51172 638 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 CXCL9Q07325 125 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 TNIP1Q15025 636 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms