RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
RER1-207ENST00000488353 TRIM5Q9C035 493 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
RER1-207ENST00000488353 PLA2G4DQ86XP0 818 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
RER1-207ENST00000488353 COL18A1P39060 1754 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 PTH1RQ03431 593 aa16.77■□□□□ 0.28
RER1-207ENST00000488353 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
RER1-207ENST00000488353 CEP135Q66GS9 1140 aa16.77■□□□□ 0.28
RER1-207ENST00000488353 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
RER1-207ENST00000488353 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
RER1-207ENST00000488353 LARGE1O95461 756 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 ZNF75DP51815 510 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 CWF19L2Q2TBE0 894 aaKnown RBP16.77■□□□□ 0.27
RER1-207ENST00000488353 HSP90AB4PQ58FF6 505 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 ZNF790Q6PG37 636 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.27
RER1-207ENST00000488353 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.27
RER1-207ENST00000488353 GJB2P29033 226 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 KMT5BQ4FZB7 885 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
RER1-207ENST00000488353 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 CYP27B1O15528 508 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 GLRX3O76003 335 aaKnown RBP16.76■□□□□ 0.27
RER1-207ENST00000488353 SLC20A2Q08357 652 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
RER1-207ENST00000488353 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
RER1-207ENST00000488353 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
RER1-207ENST00000488353 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
RER1-207ENST00000488353 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 KRT85P78386 507 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 CAMK4Q16566 473 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 IFNL2Q8IZJ0 200 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 ZNF592Q92610 1267 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
RER1-207ENST00000488353 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
RER1-207ENST00000488353 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 ELP1O95163 1332 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
RER1-207ENST00000488353 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
RER1-207ENST00000488353 TDRD7Q8NHU6 1098 aaKnown RBP16.74■□□□□ 0.27
RER1-207ENST00000488353 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
RER1-207ENST00000488353 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 VGLL3A8MV65 326 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 MYL6BP14649 208 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
RER1-207ENST00000488353 SLFNL1Q499Z3 407 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
RER1-207ENST00000488353 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
RER1-207ENST00000488353 PDIA6Q15084 440 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 AACSQ86V21 672 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
RER1-207ENST00000488353 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
RER1-207ENST00000488353 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 ZNF215Q9UL58 517 aaPredicted RBP16.73■□□□□ 0.27
RER1-207ENST00000488353 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
RER1-207ENST00000488353 NEMFO60524 1076 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
RER1-207ENST00000488353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.73■□□□□ 0.27
RER1-207ENST00000488353 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 LIG1P18858 919 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 CDC25BP30305 580 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 CCDC8Q9H0W5 538 aaPredicted RBP16.72■□□□□ 0.27
RER1-207ENST00000488353 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
RER1-207ENST00000488353 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
RER1-207ENST00000488353 CHMP3Q9Y3E7 222 aa16.72■□□□□ 0.27
RER1-207ENST00000488353 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.27
RER1-207ENST00000488353 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
RER1-207ENST00000488353 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
RER1-207ENST00000488353 RBM43Q6ZSC3 357 aaKnown RBP16.71■□□□□ 0.27
RER1-207ENST00000488353 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
RER1-207ENST00000488353 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
RER1-207ENST00000488353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.27
RER1-207ENST00000488353 USP42Q9H9J4 1324 aaKnown RBP16.71■□□□□ 0.27
RER1-207ENST00000488353 CPDO75976 1380 aa16.71■□□□□ 0.27
RER1-207ENST00000488353 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 CAVIN2O95810 425 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 ZNF165P49910 485 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 FBXO38Q6PIJ6 1188 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms