RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 TICAM2Q86XR7 235 aa24.76■■□□□ 1.55
PHF1-209ENST00000487667 CCDC8Q9H0W5 538 aaPredicted RBP24.76■■□□□ 1.55
PHF1-209ENST00000487667 MYH14Q7Z406 1995 aaKnown RBP24.75■■□□□ 1.55
PHF1-209ENST00000487667 ATP5JP18859 108 aa24.75■■□□□ 1.55
PHF1-209ENST00000487667 RABEP1Q15276 862 aa24.75■■□□□ 1.55
PHF1-209ENST00000487667 TAF7LQ5H9L4 462 aa24.75■■□□□ 1.55
PHF1-209ENST00000487667 ATG9AQ7Z3C6 839 aa24.75■■□□□ 1.55
PHF1-209ENST00000487667 TBC1D2Q9BYX2 928 aa24.75■■□□□ 1.55
PHF1-209ENST00000487667 CTSWP56202 376 aa24.74■■□□□ 1.55
PHF1-209ENST00000487667 UTP14AQ9BVJ6 771 aaKnown RBP24.74■■□□□ 1.55
PHF1-209ENST00000487667 AKAP2Q9Y2D5 859 aa24.74■■□□□ 1.55
PHF1-209ENST00000487667 SH3TC1Q8TE82 1336 aa24.74■■□□□ 1.55
PHF1-209ENST00000487667 LINC00116Q8NCU8 138 aa24.74■■□□□ 1.55
PHF1-209ENST00000487667 BRWD3Q6RI45 1802 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 CEP126Q9P2H0 1117 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 MYH3P11055 1940 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 ANKRD18BA2A2Z9 1011 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 TTLL11Q8NHH1 800 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 DIAPH3Q9NSV4 1193 aa24.73■■□□□ 1.55
PHF1-209ENST00000487667 UBN2Q6ZU65 1347 aa24.72■■□□□ 1.55
PHF1-209ENST00000487667 KIF2CQ99661 725 aa24.72■■□□□ 1.55
PHF1-209ENST00000487667 BCL11BQ9C0K0 894 aaPredicted RBP24.72■■□□□ 1.55
PHF1-209ENST00000487667 BCORQ6W2J9 1755 aa24.72■■□□□ 1.55
PHF1-209ENST00000487667 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
PHF1-209ENST00000487667 ANAPC15P60006 121 aa24.71■■□□□ 1.55
PHF1-209ENST00000487667 DBNLQ9UJU6 430 aaKnown RBP24.71■■□□□ 1.55
PHF1-209ENST00000487667 RPS6KA4O75676 772 aa24.71■■□□□ 1.55
PHF1-209ENST00000487667 CCNL1Q9UK58 526 aaPredicted RBP24.71■■□□□ 1.55
PHF1-209ENST00000487667 RFX7Q2KHR2 1363 aa24.7■■□□□ 1.54
PHF1-209ENST00000487667 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
PHF1-209ENST00000487667 LY75O60449 1722 aa24.69■■□□□ 1.54
PHF1-209ENST00000487667 SGSM2O43147 1006 aa24.69■■□□□ 1.54
PHF1-209ENST00000487667 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
PHF1-209ENST00000487667 TLR7Q9NYK1 1049 aaKnown RBP24.69■■□□□ 1.54
PHF1-209ENST00000487667 NIP7Q9Y221 180 aaKnown RBP eCLIP24.69■■□□□ 1.54
PHF1-209ENST00000487667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.69■■□□□ 1.54
PHF1-209ENST00000487667 MAP4K4O95819 1239 aaPredicted RBP24.69■■□□□ 1.54
PHF1-209ENST00000487667 KIAA1211Q6ZU35 1233 aa24.69■■□□□ 1.54
PHF1-209ENST00000487667 RAD50Q92878 1312 aa24.68■■□□□ 1.54
PHF1-209ENST00000487667 TRIM37O94972 964 aa24.68■■□□□ 1.54
PHF1-209ENST00000487667 ITGA6P23229 1130 aa24.68■■□□□ 1.54
PHF1-209ENST00000487667 SUSD4Q5VX71 490 aa24.68■■□□□ 1.54
PHF1-209ENST00000487667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.67■■□□□ 1.54
PHF1-209ENST00000487667 ZNF609O15014 1411 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 KCNQ4P56696 695 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 NBR1Q14596 966 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 LRRC24Q50LG9 513 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 ZNF594Q96JF6 807 aaPredicted RBP24.67■■□□□ 1.54
PHF1-209ENST00000487667 BOLA2Q9H3K6 86 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 RTL9Q8NET4 1388 aa24.67■■□□□ 1.54
PHF1-209ENST00000487667 IL17RAQ96F46 866 aa24.66■■□□□ 1.54
PHF1-209ENST00000487667 DBNDD2Q9BQY9 259 aa24.66■■□□□ 1.54
PHF1-209ENST00000487667 NARFQ9UHQ1 456 aa24.66■■□□□ 1.54
PHF1-209ENST00000487667 NEUROD6Q96NK8 337 aa24.65■■□□□ 1.54
PHF1-209ENST00000487667 HAUS7Q99871 368 aa24.65■■□□□ 1.54
PHF1-209ENST00000487667 GREM2Q9H772 168 aa24.65■■□□□ 1.54
PHF1-209ENST00000487667 RTCBQ9Y3I0 505 aaKnown RBP24.65■■□□□ 1.54
PHF1-209ENST00000487667 ST18O60284 1047 aa24.65■■□□□ 1.54
PHF1-209ENST00000487667 LDHAL6AQ6ZMR3 332 aa24.65■■□□□ 1.54
PHF1-209ENST00000487667 SCN7AQ01118 1682 aa24.64■■□□□ 1.54
PHF1-209ENST00000487667 LAMB2P55268 1798 aa24.64■■□□□ 1.53
PHF1-209ENST00000487667 NTSR2O95665 410 aa24.64■■□□□ 1.53
PHF1-209ENST00000487667 CCDC152Q4G0S7 254 aa24.64■■□□□ 1.53
PHF1-209ENST00000487667 FSD1Q9BTV5 496 aa24.64■■□□□ 1.53
PHF1-209ENST00000487667 A0A1B0GUL7 405 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 ABCC12Q96J65 1359 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 ZPR1O75312 459 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 CCDC158Q5M9N0 1113 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 CWC27Q6UX04 472 aaKnown RBP24.63■■□□□ 1.53
PHF1-209ENST00000487667 SYNE4Q8N205 404 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 PUS3Q9BZE2 481 aaKnown RBP24.63■■□□□ 1.53
PHF1-209ENST00000487667 NYXQ9GZU5 481 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 CNNM1Q9NRU3 951 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 RIPOR2Q9Y4F9 1068 aa24.63■■□□□ 1.53
PHF1-209ENST00000487667 SNRKQ9NRH2 765 aa24.62■■□□□ 1.53
PHF1-209ENST00000487667 MROH5Q6ZUA9 1318 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 GNPATO15228 680 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 SLC27A3Q5K4L6 730 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 SPEF2Q9C093 1822 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 K7ELQ4 463 aaPredicted RBP24.61■■□□□ 1.53
PHF1-209ENST00000487667 ADRA2BP18089 450 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 LRRFIP1Q32MZ4 808 aaKnown RBP24.61■■□□□ 1.53
PHF1-209ENST00000487667 METTL24Q5JXM2 366 aa24.61■■□□□ 1.53
PHF1-209ENST00000487667 TAF1LQ8IZX4 1826 aa24.6■■□□□ 1.53
PHF1-209ENST00000487667 HSPA4P34932 840 aa24.6■■□□□ 1.53
PHF1-209ENST00000487667 MCM2P49736 904 aa24.6■■□□□ 1.53
PHF1-209ENST00000487667 TIMM10P62072 90 aa24.59■■□□□ 1.53
PHF1-209ENST00000487667 GORABQ5T7V8 394 aa24.59■■□□□ 1.53
PHF1-209ENST00000487667 CCDC85AQ96PX6 553 aaPredicted RBP24.59■■□□□ 1.53
PHF1-209ENST00000487667 LRP5O75197 1615 aa24.59■■□□□ 1.53
PHF1-209ENST00000487667 LSG1Q9H089 658 aaKnown RBP24.59■■□□□ 1.53
PHF1-209ENST00000487667 C4BP0C0L5 1744 aa24.58■■□□□ 1.52
PHF1-209ENST00000487667 ATP2B3Q16720 1220 aa24.57■■□□□ 1.52
PHF1-209ENST00000487667 IFIT1P09914 478 aaKnown RBP24.57■■□□□ 1.52
PHF1-209ENST00000487667 HCLS1P14317 486 aaPredicted RBP24.57■■□□□ 1.52
PHF1-209ENST00000487667 KBTBD3Q8NAB2 608 aa24.57■■□□□ 1.52
PHF1-209ENST00000487667 SETDB2Q96T68 719 aa24.57■■□□□ 1.52
PHF1-209ENST00000487667 MPHOSPH8Q99549 860 aa24.57■■□□□ 1.52
PHF1-209ENST00000487667 DDX60Q8IY21 1712 aaKnown RBP24.57■■□□□ 1.52
PHF1-209ENST00000487667 RIC1Q4ADV7 1423 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms