RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
SREBF1-215ENST00000487401 MYD88Q99836 296 aa16.05■□□□□ 0.16
SREBF1-215ENST00000487401 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
SREBF1-215ENST00000487401 CCDC27Q2M243 656 aa16.04■□□□□ 0.16
SREBF1-215ENST00000487401 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
SREBF1-215ENST00000487401 ZBTB38Q8NAP3 1195 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-215ENST00000487401 MKRN1Q9UHC7 482 aaKnown RBP16.04■□□□□ 0.16
SREBF1-215ENST00000487401 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 TMEM88BA6NKF7 163 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-215ENST00000487401 EPS15P42566 896 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 KIAA2012Q0VF49 1180 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-215ENST00000487401 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
SREBF1-215ENST00000487401 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
SREBF1-215ENST00000487401 SCNN1DP51172 638 aa16.02■□□□□ 0.16
SREBF1-215ENST00000487401 CXCL9Q07325 125 aa16.02■□□□□ 0.16
SREBF1-215ENST00000487401 TNIP1Q15025 636 aa16.02■□□□□ 0.16
SREBF1-215ENST00000487401 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-215ENST00000487401 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
SREBF1-215ENST00000487401 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.16
SREBF1-215ENST00000487401 METTL22Q9BUU2 404 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-215ENST00000487401 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-215ENST00000487401 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
SREBF1-215ENST00000487401 ARFGEF2Q9Y6D5 1785 aa16.02■□□□□ 0.15
SREBF1-215ENST00000487401 NUP98P52948 1817 aa16.01■□□□□ 0.15
SREBF1-215ENST00000487401 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
SREBF1-215ENST00000487401 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
SREBF1-215ENST00000487401 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
SREBF1-215ENST00000487401 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
SREBF1-215ENST00000487401 RAD17O75943 681 aa16■□□□□ 0.15
SREBF1-215ENST00000487401 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
SREBF1-215ENST00000487401 WASHC4Q2M389 1173 aa16■□□□□ 0.15
SREBF1-215ENST00000487401 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
SREBF1-215ENST00000487401 ADARB2Q9NS39 739 aaKnown RBP16■□□□□ 0.15
SREBF1-215ENST00000487401 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
SREBF1-215ENST00000487401 IL16Q14005 1332 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 GPSM2P81274 684 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 EYA3Q99504 573 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-215ENST00000487401 COL4A5P29400 1685 aa15.99■□□□□ 0.15
SREBF1-215ENST00000487401 PI4KAP2A4QPH2 592 aa15.98■□□□□ 0.15
SREBF1-215ENST00000487401 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
SREBF1-215ENST00000487401 PDE8AO60658 829 aa15.98■□□□□ 0.15
SREBF1-215ENST00000487401 PI4KAP1Q8N8J0 262 aa15.98■□□□□ 0.15
SREBF1-215ENST00000487401 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
SREBF1-215ENST00000487401 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-215ENST00000487401 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
SREBF1-215ENST00000487401 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
SREBF1-215ENST00000487401 ABT1Q9ULW3 272 aaKnown RBP15.97■□□□□ 0.15
SREBF1-215ENST00000487401 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
SREBF1-215ENST00000487401 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
SREBF1-215ENST00000487401 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
SREBF1-215ENST00000487401 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
SREBF1-215ENST00000487401 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
SREBF1-215ENST00000487401 CACNA1SQ13698 1873 aa15.96■□□□□ 0.15
SREBF1-215ENST00000487401 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
SREBF1-215ENST00000487401 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 G3V3G9 751 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 H7C1D1 291 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 VEGFBP49765 207 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-215ENST00000487401 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
SREBF1-215ENST00000487401 CNOT7Q9UIV1 285 aaKnown RBP15.95■□□□□ 0.14
SREBF1-215ENST00000487401 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
SREBF1-215ENST00000487401 G2E3Q7L622 706 aa15.94■□□□□ 0.14
SREBF1-215ENST00000487401 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
SREBF1-215ENST00000487401 GGA1Q9UJY5 639 aa15.94■□□□□ 0.14
SREBF1-215ENST00000487401 TRAF5O00463 557 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 PSMD14O00487 310 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 ECE2O60344 883 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 UFL1O94874 794 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 GPR101Q96P66 508 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-215ENST00000487401 PODXL2Q9NZ53 605 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-215ENST00000487401 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
SREBF1-215ENST00000487401 SCN4AP35499 1836 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 RASSF10A6NK89 507 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 CTSWP56202 376 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
SREBF1-215ENST00000487401 FLIIQ13045 1269 aa15.92■□□□□ 0.14
SREBF1-215ENST00000487401 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms