RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-223ENST00000486991 PPEF1O14829 653 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-223ENST00000486991 EPS15P42566 896 aa16.74■□□□□ 0.27
NR1H3-223ENST00000486991 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
NR1H3-223ENST00000486991 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-223ENST00000486991 LARGE2Q8N3Y3 721 aa16.74■□□□□ 0.27
NR1H3-223ENST00000486991 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
NR1H3-223ENST00000486991 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
NR1H3-223ENST00000486991 TCIRG1Q13488 830 aa16.73■□□□□ 0.27
NR1H3-223ENST00000486991 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
NR1H3-223ENST00000486991 NLRP10Q86W26 655 aa16.73■□□□□ 0.27
NR1H3-223ENST00000486991 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
NR1H3-223ENST00000486991 COL4A1P02462 1669 aa16.72■□□□□ 0.27
NR1H3-223ENST00000486991 SCNN1DP51172 638 aa16.72■□□□□ 0.27
NR1H3-223ENST00000486991 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-223ENST00000486991 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
NR1H3-223ENST00000486991 HYPKQ9NX55 129 aa16.72■□□□□ 0.27
NR1H3-223ENST00000486991 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
NR1H3-223ENST00000486991 AOC3Q16853 763 aa16.71■□□□□ 0.27
NR1H3-223ENST00000486991 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
NR1H3-223ENST00000486991 ISCA1Q9BUE6 129 aa16.71■□□□□ 0.27
NR1H3-223ENST00000486991 CHMP4AQ9BY43 222 aa16.71■□□□□ 0.27
NR1H3-223ENST00000486991 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
NR1H3-223ENST00000486991 LRRC37AA6NMS7 1700 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 TRAF5O00463 557 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 VAMP4O75379 141 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 HCLS1P14317 486 aaPredicted RBP16.7■□□□□ 0.26
NR1H3-223ENST00000486991 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 SLC10A5Q5PT55 438 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
NR1H3-223ENST00000486991 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
NR1H3-223ENST00000486991 ABCC4O15439 1325 aa16.7■□□□□ 0.26
NR1H3-223ENST00000486991 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-223ENST00000486991 LMOD1P29536 600 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-223ENST00000486991 LBX1P52954 281 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 WBP1LQ9NX94 342 aa16.69■□□□□ 0.26
NR1H3-223ENST00000486991 ATP6V0A2Q9Y487 856 aa16.68■□□□□ 0.26
NR1H3-223ENST00000486991 MYH3P11055 1940 aa16.68■□□□□ 0.26
NR1H3-223ENST00000486991 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
NR1H3-223ENST00000486991 CTCFP49711 727 aaPredicted RBP16.67■□□□□ 0.26
NR1H3-223ENST00000486991 GRM1Q13255 1194 aa16.67■□□□□ 0.26
NR1H3-223ENST00000486991 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 CXCL9Q07325 125 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
NR1H3-223ENST00000486991 CCDC30Q5VVM6 783 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 CST9Q5W186 159 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 RCAN3Q9UKA8 241 aa16.66■□□□□ 0.26
NR1H3-223ENST00000486991 HSPA8P11142 646 aaKnown RBP16.65■□□□□ 0.26
NR1H3-223ENST00000486991 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
NR1H3-223ENST00000486991 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-223ENST00000486991 BCL2L13Q9BXK5 485 aa16.65■□□□□ 0.26
NR1H3-223ENST00000486991 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
NR1H3-223ENST00000486991 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 SHTN1A0MZ66 631 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 RAD17O75943 681 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 GMPSP49915 693 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-223ENST00000486991 RARSP54136 660 aaKnown RBP16.64■□□□□ 0.25
NR1H3-223ENST00000486991 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-223ENST00000486991 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-223ENST00000486991 G2E3Q7L622 706 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 GPRC5DQ9NZD1 345 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
NR1H3-223ENST00000486991 ZNRF3Q9ULT6 936 aa16.64■□□□□ 0.25
NR1H3-223ENST00000486991 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
NR1H3-223ENST00000486991 MPNDQ8N594 471 aa16.63■□□□□ 0.25
NR1H3-223ENST00000486991 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
NR1H3-223ENST00000486991 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
NR1H3-223ENST00000486991 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
NR1H3-223ENST00000486991 AOC2O75106 756 aa16.62■□□□□ 0.25
NR1H3-223ENST00000486991 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
NR1H3-223ENST00000486991 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-223ENST00000486991 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
NR1H3-223ENST00000486991 BCAR3O75815 825 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 BBOX1O75936 387 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 HIRAP54198 1017 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-223ENST00000486991 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-223ENST00000486991 DLK2Q6UY11 383 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
NR1H3-223ENST00000486991 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
NR1H3-223ENST00000486991 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-223ENST00000486991 TSKSQ9UJT2 592 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
NR1H3-223ENST00000486991 YDJCA8MPS7 323 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 IGKV5-2P06315 115 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms