RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TAF1P21675 1872 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 GNAI3P08754 354 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 NPR1P16066 1061 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 DPEP1P16444 411 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
NUP50-216ENST00000486184 CHMP4BQ9H444 224 aaKnown RBP14.31□□□□□ -0.12
NUP50-216ENST00000486184 ARFGEF1Q9Y6D6 1849 aa14.31□□□□□ -0.12
NUP50-216ENST00000486184 NBPF7P0C2Y1 421 aaPredicted RBP14.3□□□□□ -0.12
NUP50-216ENST00000486184 SRGNP10124 158 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 RLBP1P12271 317 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 STYK1Q6J9G0 422 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 DDX46Q7L014 1031 aaKnown RBP14.3□□□□□ -0.12
NUP50-216ENST00000486184 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 CHMP3Q9Y3E7 222 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 UTYO14607 1347 aa14.3□□□□□ -0.12
NUP50-216ENST00000486184 ALDH1B1P30837 517 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 CTSWP56202 376 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
NUP50-216ENST00000486184 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
NUP50-216ENST00000486184 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 PLA2G12BQ9BX93 195 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
NUP50-216ENST00000486184 SUPT16HQ9Y5B9 1047 aaKnown RBP14.29□□□□□ -0.12
NUP50-216ENST00000486184 KLRG2A4D1S0 409 aaPredicted RBP14.28□□□□□ -0.12
NUP50-216ENST00000486184 CASP7P55210 303 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 SF3B3Q15393 1217 aaKnown RBP14.28□□□□□ -0.12
NUP50-216ENST00000486184 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 TTLL6Q8N841 843 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
NUP50-216ENST00000486184 MEIS3Q99687 375 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 WWC3Q9ULE0 1092 aa14.28□□□□□ -0.12
NUP50-216ENST00000486184 SLX4Q8IY92 1834 aa14.27□□□□□ -0.12
NUP50-216ENST00000486184 DSG3P32926 999 aa14.27□□□□□ -0.13
NUP50-216ENST00000486184 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.13
NUP50-216ENST00000486184 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
NUP50-216ENST00000486184 GNAI2P04899 355 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 LMBR1LQ6UX01 489 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 BICC1Q9H694 974 aaKnown RBP14.26□□□□□ -0.13
NUP50-216ENST00000486184 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
NUP50-216ENST00000486184 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
NUP50-216ENST00000486184 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 KCNA3P22001 575 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
NUP50-216ENST00000486184 FOXO4P98177 505 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 IFIT5Q13325 482 aaKnown RBP14.25□□□□□ -0.13
NUP50-216ENST00000486184 GPR162Q16538 588 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
NUP50-216ENST00000486184 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
NUP50-216ENST00000486184 CDC5LQ99459 802 aaKnown RBP14.25□□□□□ -0.13
NUP50-216ENST00000486184 RTL9Q8NET4 1388 aa14.24□□□□□ -0.13
NUP50-216ENST00000486184 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
NUP50-216ENST00000486184 GRAPQ13588 217 aa14.24□□□□□ -0.13
NUP50-216ENST00000486184 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
NUP50-216ENST00000486184 ANKRD18AQ8IVF6 992 aa14.24□□□□□ -0.13
NUP50-216ENST00000486184 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
NUP50-216ENST00000486184 GREM2Q9H772 168 aa14.24□□□□□ -0.13
NUP50-216ENST00000486184 ZBTB7BO15156 539 aaPredicted RBP14.23□□□□□ -0.13
NUP50-216ENST00000486184 CSF1RP07333 972 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 ITGA6P23229 1130 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
NUP50-216ENST00000486184 EPHA10Q5JZY3 1008 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 LRRC37AA6NMS7 1700 aa14.23□□□□□ -0.13
NUP50-216ENST00000486184 ABCB7O75027 752 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 BBOX1O75936 387 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 POLA2Q14181 598 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
NUP50-216ENST00000486184 ANKRD44Q8N8A2 993 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
NUP50-216ENST00000486184 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.13
NUP50-216ENST00000486184 C21orf2O43822 256 aa14.21□□□□□ -0.13
NUP50-216ENST00000486184 RPS8P62241 208 aaKnown RBP14.21□□□□□ -0.13
NUP50-216ENST00000486184 CELF1Q92879 486 aaKnown RBP14.21□□□□□ -0.13
NUP50-216ENST00000486184 CRBNQ96SW2 442 aa14.21□□□□□ -0.13
NUP50-216ENST00000486184 A0A1B0GUL6 1792 aa14.21□□□□□ -0.13
NUP50-216ENST00000486184 CCDC88AQ3V6T2 1871 aa14.21□□□□□ -0.14
NUP50-216ENST00000486184 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
NUP50-216ENST00000486184 COL4A1P02462 1669 aa14.2□□□□□ -0.14
NUP50-216ENST00000486184 GRIN3BO60391 1043 aa14.19□□□□□ -0.14
NUP50-216ENST00000486184 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
NUP50-216ENST00000486184 CC2D2BQ6DHV5 1058 aa14.19□□□□□ -0.14
NUP50-216ENST00000486184 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
NUP50-216ENST00000486184 ATP6V0A2Q9Y487 856 aa14.19□□□□□ -0.14
NUP50-216ENST00000486184 YBX3P16989 372 aaKnown RBP eCLIP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms