RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 PPP4R2Q9NY27 417 aa23.24■■□□□ 1.31
ERCC2-205ENST00000485403 CACNA1SQ13698 1873 aa23.24■■□□□ 1.31
ERCC2-205ENST00000485403 GRM8O00222 908 aa23.23■■□□□ 1.31
ERCC2-205ENST00000485403 HOXA10P31260 410 aaPredicted RBP23.23■■□□□ 1.31
ERCC2-205ENST00000485403 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
ERCC2-205ENST00000485403 UTYO14607 1347 aa23.23■■□□□ 1.31
ERCC2-205ENST00000485403 AAMPQ13685 434 aa23.23■■□□□ 1.31
ERCC2-205ENST00000485403 SF3B3Q15393 1217 aaKnown RBP23.23■■□□□ 1.31
ERCC2-205ENST00000485403 ZBTB7BO15156 539 aaPredicted RBP23.22■■□□□ 1.31
ERCC2-205ENST00000485403 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
ERCC2-205ENST00000485403 TTLL6Q8N841 843 aa23.22■■□□□ 1.31
ERCC2-205ENST00000485403 PLA2G12BQ9BX93 195 aa23.22■■□□□ 1.31
ERCC2-205ENST00000485403 PDE8AO60658 829 aa23.21■■□□□ 1.31
ERCC2-205ENST00000485403 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
ERCC2-205ENST00000485403 CNKSR1Q969H4 720 aa23.21■■□□□ 1.31
ERCC2-205ENST00000485403 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
ERCC2-205ENST00000485403 WWC3Q9ULE0 1092 aa23.21■■□□□ 1.31
ERCC2-205ENST00000485403 RPGRQ92834 1020 aaKnown RBP23.2■■□□□ 1.3
ERCC2-205ENST00000485403 C9orf78Q9NZ63 289 aaPredicted RBP23.2■■□□□ 1.3
ERCC2-205ENST00000485403 TAF1P21675 1872 aa23.2■■□□□ 1.3
ERCC2-205ENST00000485403 CRAMP1Q96RY5 1269 aa23.19■■□□□ 1.3
ERCC2-205ENST00000485403 USP44Q9H0E7 712 aa23.19■■□□□ 1.3
ERCC2-205ENST00000485403 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
ERCC2-205ENST00000485403 ALDH1B1P30837 517 aa23.18■■□□□ 1.3
ERCC2-205ENST00000485403 BCS1LQ9Y276 419 aa23.18■■□□□ 1.3
ERCC2-205ENST00000485403 NBPF7P0C2Y1 421 aaPredicted RBP23.18■■□□□ 1.3
ERCC2-205ENST00000485403 GPR162Q16538 588 aa23.18■■□□□ 1.3
ERCC2-205ENST00000485403 PRPF40BQ6NWY9 871 aaKnown RBP23.18■■□□□ 1.3
ERCC2-205ENST00000485403 RBM17Q96I25 401 aaKnown RBP23.18■■□□□ 1.3
ERCC2-205ENST00000485403 CTSWP56202 376 aa23.17■■□□□ 1.3
ERCC2-205ENST00000485403 MEIS3Q99687 375 aa23.17■■□□□ 1.3
ERCC2-205ENST00000485403 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
ERCC2-205ENST00000485403 TTLL11Q8NHH1 800 aa23.16■■□□□ 1.3
ERCC2-205ENST00000485403 GNAI3P08754 354 aa23.15■■□□□ 1.3
ERCC2-205ENST00000485403 CCDC152Q4G0S7 254 aa23.15■■□□□ 1.3
ERCC2-205ENST00000485403 C7orf43Q8WVR3 580 aa23.15■■□□□ 1.3
ERCC2-205ENST00000485403 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
ERCC2-205ENST00000485403 COL4A1P02462 1669 aa23.15■■□□□ 1.3
ERCC2-205ENST00000485403 CSF1RP07333 972 aa23.14■■□□□ 1.3
ERCC2-205ENST00000485403 FOXO4P98177 505 aa23.14■■□□□ 1.3
ERCC2-205ENST00000485403 DDX46Q7L014 1031 aaKnown RBP23.14■■□□□ 1.3
ERCC2-205ENST00000485403 KAZALD1Q96I82 304 aa23.14■■□□□ 1.3
ERCC2-205ENST00000485403 CCDC136Q96JN2 1154 aa23.14■■□□□ 1.3
ERCC2-205ENST00000485403 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 GRIN3BO60391 1043 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 B4GALNT3Q6L9W6 998 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 FER1L6Q2WGJ9 1857 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 GRAPQ13588 217 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 EPHA10Q5JZY3 1008 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 GRAPLQ8TC17 118 aaPredicted RBP23.13■■□□□ 1.29
ERCC2-205ENST00000485403 SUCLG2Q96I99 432 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 C1orf115Q9H7X2 142 aa23.13■■□□□ 1.29
ERCC2-205ENST00000485403 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
ERCC2-205ENST00000485403 PCDHB15Q9Y5E8 787 aa23.12■■□□□ 1.29
ERCC2-205ENST00000485403 GREM2Q9H772 168 aa23.11■■□□□ 1.29
ERCC2-205ENST00000485403 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
ERCC2-205ENST00000485403 C21orf2O43822 256 aa23.1■■□□□ 1.29
ERCC2-205ENST00000485403 BBOX1O75936 387 aa23.1■■□□□ 1.29
ERCC2-205ENST00000485403 GNAI2P04899 355 aa23.1■■□□□ 1.29
ERCC2-205ENST00000485403 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
ERCC2-205ENST00000485403 CELF1Q92879 486 aaKnown RBP23.1■■□□□ 1.29
ERCC2-205ENST00000485403 CCDC85AQ96PX6 553 aaPredicted RBP23.1■■□□□ 1.29
ERCC2-205ENST00000485403 SEC31BQ9NQW1 1179 aa23.1■■□□□ 1.29
ERCC2-205ENST00000485403 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
ERCC2-205ENST00000485403 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
ERCC2-205ENST00000485403 CHD4Q14839 1912 aa23.09■■□□□ 1.29
ERCC2-205ENST00000485403 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
ERCC2-205ENST00000485403 SOGA3Q5TF21 947 aa23.08■■□□□ 1.29
ERCC2-205ENST00000485403 LMBR1LQ6UX01 489 aa23.08■■□□□ 1.29
ERCC2-205ENST00000485403 BICC1Q9H694 974 aaKnown RBP23.08■■□□□ 1.29
ERCC2-205ENST00000485403 HDAC5Q9UQL6 1122 aa23.08■■□□□ 1.29
ERCC2-205ENST00000485403 TMC4Q7Z404 712 aa23.08■■□□□ 1.28
ERCC2-205ENST00000485403 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.28
ERCC2-205ENST00000485403 SBF1O95248 1867 aa23.07■■□□□ 1.28
ERCC2-205ENST00000485403 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
ERCC2-205ENST00000485403 ATP6V0A2Q9Y487 856 aa23.07■■□□□ 1.28
ERCC2-205ENST00000485403 LRRFIP2Q9Y608 721 aaKnown RBP23.07■■□□□ 1.28
ERCC2-205ENST00000485403 SPEF2Q9C093 1822 aa23.07■■□□□ 1.28
ERCC2-205ENST00000485403 ITGA6P23229 1130 aa23.06■■□□□ 1.28
ERCC2-205ENST00000485403 CC2D2BQ6DHV5 1058 aa23.06■■□□□ 1.28
ERCC2-205ENST00000485403 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
ERCC2-205ENST00000485403 CDC5LQ99459 802 aaKnown RBP23.06■■□□□ 1.28
ERCC2-205ENST00000485403 ZNF219Q9P2Y4 722 aaPredicted RBP23.06■■□□□ 1.28
ERCC2-205ENST00000485403 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
ERCC2-205ENST00000485403 SLC51AQ86UW1 340 aa23.05■■□□□ 1.28
ERCC2-205ENST00000485403 SP8Q8IXZ3 490 aa23.05■■□□□ 1.28
ERCC2-205ENST00000485403 RWDD1Q9H446 243 aaPredicted RBP23.05■■□□□ 1.28
ERCC2-205ENST00000485403 ARHGAP27Q6ZUM4 889 aa23.04■■□□□ 1.28
ERCC2-205ENST00000485403 NFKBIEO00221 500 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 GRIPAP1Q4V328 841 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 CEP85Q6P2H3 762 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
ERCC2-205ENST00000485403 LTBP1Q14766 1721 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 CCDC88AQ3V6T2 1871 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 IFIT5Q13325 482 aaKnown RBP23.03■■□□□ 1.28
ERCC2-205ENST00000485403 RTKN2Q8IZC4 609 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
ERCC2-205ENST00000485403 ANKRD18BA2A2Z9 1011 aa23.02■■□□□ 1.28
ERCC2-205ENST00000485403 HDAC1Q13547 482 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms