RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
NUP50-215ENST00000484186 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
NUP50-215ENST00000484186 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
NUP50-215ENST00000484186 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
NUP50-215ENST00000484186 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
NUP50-215ENST00000484186 ANP32CO43423 234 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
NUP50-215ENST00000484186 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
NUP50-215ENST00000484186 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
NUP50-215ENST00000484186 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
NUP50-215ENST00000484186 MYD88Q99836 296 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 LAMB2P55268 1798 aa12.17□□□□□ -0.46
NUP50-215ENST00000484186 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
NUP50-215ENST00000484186 EPS15P42566 896 aa12.16□□□□□ -0.46
NUP50-215ENST00000484186 SCNN1DP51172 638 aa12.16□□□□□ -0.46
NUP50-215ENST00000484186 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
NUP50-215ENST00000484186 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
NUP50-215ENST00000484186 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
NUP50-215ENST00000484186 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
NUP50-215ENST00000484186 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
NUP50-215ENST00000484186 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
NUP50-215ENST00000484186 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
NUP50-215ENST00000484186 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
NUP50-215ENST00000484186 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
NUP50-215ENST00000484186 CXCL9Q07325 125 aa12.15□□□□□ -0.46
NUP50-215ENST00000484186 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
NUP50-215ENST00000484186 IL16Q14005 1332 aa12.14□□□□□ -0.47
NUP50-215ENST00000484186 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
NUP50-215ENST00000484186 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 CIAPIN1Q6FI81 312 aa12.14□□□□□ -0.47
NUP50-215ENST00000484186 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
NUP50-215ENST00000484186 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
NUP50-215ENST00000484186 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 TAF1P21675 1872 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 PDE8AO60658 829 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 TNIP1Q15025 636 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
NUP50-215ENST00000484186 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
NUP50-215ENST00000484186 LTBP1Q14766 1721 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 RAD17O75943 681 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
NUP50-215ENST00000484186 GPSM2P81274 684 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
NUP50-215ENST00000484186 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
NUP50-215ENST00000484186 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
NUP50-215ENST00000484186 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
NUP50-215ENST00000484186 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
NUP50-215ENST00000484186 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 EYA3Q99504 573 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
NUP50-215ENST00000484186 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
NUP50-215ENST00000484186 G2E3Q7L622 706 aa12.1□□□□□ -0.47
NUP50-215ENST00000484186 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
NUP50-215ENST00000484186 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
NUP50-215ENST00000484186 CNOT7Q9UIV1 285 aaKnown RBP12.1□□□□□ -0.47
NUP50-215ENST00000484186 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 LRRC37AA6NMS7 1700 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 VEGFBP49765 207 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
NUP50-215ENST00000484186 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
NUP50-215ENST00000484186 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 ANKIB1Q9P2G1 1089 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 COL4A1P02462 1669 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
NUP50-215ENST00000484186 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 H7C1D1 291 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 PSMD14O00487 310 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 ECE2O60344 883 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 VAMP4O75379 141 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 CTSWP56202 376 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP50-215ENST00000484186 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
NUP50-215ENST00000484186 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 DPF2Q92785 391 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms