RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 SLC34A2O95436 690 aa21.6■■□□□ 1.05
PCGF3-211ENST00000484141 HSPA8P11142 646 aaKnown RBP21.6■■□□□ 1.05
PCGF3-211ENST00000484141 MAP1SQ66K74 1059 aaPredicted RBP21.6■■□□□ 1.05
PCGF3-211ENST00000484141 PNMA8AQ86V59 439 aaPredicted RBP21.6■■□□□ 1.05
PCGF3-211ENST00000484141 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
PCGF3-211ENST00000484141 ABHD8Q96I13 439 aa21.6■■□□□ 1.05
PCGF3-211ENST00000484141 RNF123Q5XPI4 1314 aa21.59■■□□□ 1.05
PCGF3-211ENST00000484141 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
PCGF3-211ENST00000484141 JARID2Q92833 1246 aaPredicted RBP21.59■■□□□ 1.05
PCGF3-211ENST00000484141 ABT1Q9ULW3 272 aaKnown RBP21.59■■□□□ 1.05
PCGF3-211ENST00000484141 MAP2K1Q02750 393 aaPredicted RBP21.58■■□□□ 1.05
PCGF3-211ENST00000484141 FAM161AQ3B820 660 aa21.58■■□□□ 1.05
PCGF3-211ENST00000484141 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.05
PCGF3-211ENST00000484141 PSMD1Q99460 953 aa21.58■■□□□ 1.05
PCGF3-211ENST00000484141 WDR33Q9C0J8 1336 aaKnown RBP21.57■■□□□ 1.04
PCGF3-211ENST00000484141 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
PCGF3-211ENST00000484141 MYD88Q99836 296 aa21.57■■□□□ 1.04
PCGF3-211ENST00000484141 G2E3Q7L622 706 aa21.56■■□□□ 1.04
PCGF3-211ENST00000484141 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
PCGF3-211ENST00000484141 FZD9O00144 591 aa21.55■■□□□ 1.04
PCGF3-211ENST00000484141 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
PCGF3-211ENST00000484141 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
PCGF3-211ENST00000484141 ADAMTSL1Q8N6G6 1762 aa21.55■■□□□ 1.04
PCGF3-211ENST00000484141 CCDC30Q5VVM6 783 aa21.54■■□□□ 1.04
PCGF3-211ENST00000484141 CC2D2BQ6DHV5 1058 aa21.54■■□□□ 1.04
PCGF3-211ENST00000484141 GPC2Q8N158 579 aa21.54■■□□□ 1.04
PCGF3-211ENST00000484141 AOC3Q16853 763 aa21.53■■□□□ 1.04
PCGF3-211ENST00000484141 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
PCGF3-211ENST00000484141 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
PCGF3-211ENST00000484141 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
PCGF3-211ENST00000484141 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
PCGF3-211ENST00000484141 IRS4O14654 1257 aaPredicted RBP21.52■■□□□ 1.04
PCGF3-211ENST00000484141 TRIM28Q13263 835 aaKnown RBP21.52■■□□□ 1.04
PCGF3-211ENST00000484141 GRAPQ13588 217 aa21.52■■□□□ 1.04
PCGF3-211ENST00000484141 PAXIP1Q6ZW49 1069 aaPredicted RBP21.52■■□□□ 1.04
PCGF3-211ENST00000484141 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
PCGF3-211ENST00000484141 GRAPLQ8TC17 118 aaPredicted RBP21.52■■□□□ 1.04
PCGF3-211ENST00000484141 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
PCGF3-211ENST00000484141 LTBP1Q14766 1721 aa21.52■■□□□ 1.03
PCGF3-211ENST00000484141 SP8Q8IXZ3 490 aa21.51■■□□□ 1.03
PCGF3-211ENST00000484141 MAP3K2Q9Y2U5 619 aa21.51■■□□□ 1.03
PCGF3-211ENST00000484141 GJA3Q9Y6H8 435 aa21.51■■□□□ 1.03
PCGF3-211ENST00000484141 PPIP5K2O43314 1243 aa21.5■■□□□ 1.03
PCGF3-211ENST00000484141 BBOX1O75936 387 aa21.5■■□□□ 1.03
PCGF3-211ENST00000484141 EIF6P56537 245 aaKnown RBP21.5■■□□□ 1.03
PCGF3-211ENST00000484141 SF3B3Q15393 1217 aaKnown RBP21.5■■□□□ 1.03
PCGF3-211ENST00000484141 BEGAINQ9BUH8 593 aa21.5■■□□□ 1.03
PCGF3-211ENST00000484141 METTL22Q9BUU2 404 aaPredicted RBP21.5■■□□□ 1.03
PCGF3-211ENST00000484141 IL16Q14005 1332 aa21.5■■□□□ 1.03
PCGF3-211ENST00000484141 DUOX1Q9NRD9 1551 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 PI4KAP2A4QPH2 592 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 CCDC85CA6NKD9 419 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 IGKV5-2P06315 115 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 LMOD1P29536 600 aaPredicted RBP21.49■■□□□ 1.03
PCGF3-211ENST00000484141 GRM1Q13255 1194 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 PI4KAP1Q8N8J0 262 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 ZBTB38Q8NAP3 1195 aaPredicted RBP21.49■■□□□ 1.03
PCGF3-211ENST00000484141 CAPNS2Q96L46 248 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 CCDC85AQ96PX6 553 aaPredicted RBP21.49■■□□□ 1.03
PCGF3-211ENST00000484141 SEC31BQ9NQW1 1179 aa21.49■■□□□ 1.03
PCGF3-211ENST00000484141 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
PCGF3-211ENST00000484141 ECE1P42892 770 aa21.48■■□□□ 1.03
PCGF3-211ENST00000484141 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
PCGF3-211ENST00000484141 DPP8Q6V1X1 898 aaPredicted RBP21.48■■□□□ 1.03
PCGF3-211ENST00000484141 MPNDQ8N594 471 aa21.48■■□□□ 1.03
PCGF3-211ENST00000484141 LRRC37AA6NMS7 1700 aa21.48■■□□□ 1.03
PCGF3-211ENST00000484141 MLLT1Q03111 559 aaPredicted RBP21.47■■□□□ 1.03
PCGF3-211ENST00000484141 FMR1Q06787 632 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCGF3-211ENST00000484141 RTFDC1Q9BY42 306 aaPredicted RBP21.47■■□□□ 1.03
PCGF3-211ENST00000484141 VAMP4O75379 141 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 CWF19L2Q2TBE0 894 aaKnown RBP21.46■■□□□ 1.03
PCGF3-211ENST00000484141 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
PCGF3-211ENST00000484141 CYP4F22Q6NT55 531 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 KSR2Q6VAB6 950 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 CCDC191Q8NCU4 936 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 GPR101Q96P66 508 aaPredicted RBP21.46■■□□□ 1.03
PCGF3-211ENST00000484141 STK31Q9BXU1 1019 aa21.46■■□□□ 1.03
PCGF3-211ENST00000484141 CWC25Q9NXE8 425 aaPredicted RBP21.46■■□□□ 1.03
PCGF3-211ENST00000484141 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
PCGF3-211ENST00000484141 PCCAP05165 728 aaPredicted RBP21.45■■□□□ 1.02
PCGF3-211ENST00000484141 GRIPAP1Q4V328 841 aa21.45■■□□□ 1.02
PCGF3-211ENST00000484141 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
PCGF3-211ENST00000484141 EPS15P42566 896 aa21.44■■□□□ 1.02
PCGF3-211ENST00000484141 SCNN1DP51172 638 aa21.44■■□□□ 1.02
PCGF3-211ENST00000484141 GPSM2P81274 684 aa21.44■■□□□ 1.02
PCGF3-211ENST00000484141 THSD7BQ9C0I4 1608 aa21.44■■□□□ 1.02
PCGF3-211ENST00000484141 TRAF5O00463 557 aa21.43■■□□□ 1.02
PCGF3-211ENST00000484141 CXCL9Q07325 125 aa21.43■■□□□ 1.02
PCGF3-211ENST00000484141 POLLQ9UGP5 575 aa21.43■■□□□ 1.02
PCGF3-211ENST00000484141 TSKSQ9UJT2 592 aa21.43■■□□□ 1.02
PCGF3-211ENST00000484141 YDJCA8MPS7 323 aa21.42■■□□□ 1.02
PCGF3-211ENST00000484141 FLIIQ13045 1269 aa21.42■■□□□ 1.02
PCGF3-211ENST00000484141 CST9Q5W186 159 aa21.42■■□□□ 1.02
PCGF3-211ENST00000484141 USP50Q70EL3 339 aaPredicted RBP21.42■■□□□ 1.02
PCGF3-211ENST00000484141 NSFL1CQ9UNZ2 370 aaKnown RBP21.42■■□□□ 1.02
PCGF3-211ENST00000484141 NEURL1BA8MQ27 555 aa21.41■■□□□ 1.02
PCGF3-211ENST00000484141 RIMBP2O15034 1052 aa21.41■■□□□ 1.02
PCGF3-211ENST00000484141 PDE8AO60658 829 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms