RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SRLQ86TD4 932 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 SH2B1Q9NRF2 756 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 CCDC192P0DO97 292 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 LRRN4CLQ8ND94 238 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 FAM200AQ8TCP9 573 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 ZCCHC17Q9NP64 241 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
SEC61A1-205ENST00000483956 SRGAP3O43295 1099 aa13.58□□□□□ -0.23
SEC61A1-205ENST00000483956 MAP4K4O95819 1239 aaPredicted RBP13.58□□□□□ -0.23
SEC61A1-205ENST00000483956 TRIM5Q9C035 493 aa13.58□□□□□ -0.23
SEC61A1-205ENST00000483956 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 TPM4P67936 248 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 DIP2AQ14689 1571 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 HOXB7P09629 217 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 ZNF75DP51815 510 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 CEP83Q9Y592 693 aa13.58□□□□□ -0.24
SEC61A1-205ENST00000483956 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 GJB2P29033 226 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 CEMIPQ8WUJ3 1361 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 LARGE1O95461 756 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 CCDC172P0C7W6 258 aa13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 CWC27Q6UX04 472 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 CWC15Q9P013 229 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-205ENST00000483956 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 MTX1Q13505 466 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 PLA2G4DQ86XP0 818 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 HOXC9P31274 260 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-205ENST00000483956 ELP1O95163 1332 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 ZRANB2O95218 330 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 GPS2Q13227 327 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 E2F4Q16254 413 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
SEC61A1-205ENST00000483956 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 TYRO3Q06418 890 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 CAMK4Q16566 473 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 OAS2P29728 719 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
SEC61A1-205ENST00000483956 SEC31AO94979 1220 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 CPA1P15085 419 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 PTH1RQ03431 593 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 NECTIN1Q15223 517 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 LRRC8AQ8IWT6 810 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 GOLGA5Q8TBA6 731 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 ANKARQ7Z5J8 1434 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 TMCO3Q6UWJ1 677 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 ECHDC1Q9NTX5 307 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 LTKP29376 864 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 REXO1L1PQ8IX06 675 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 CLASRPQ8N2M8 674 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 SNRKQ9NRH2 765 aa13.53□□□□□ -0.24
SEC61A1-205ENST00000483956 SKILP12757 684 aa13.52□□□□□ -0.24
SEC61A1-205ENST00000483956 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms